Let KAYAK do the searching
Based on KAYAK hotel searches, the most popular destination is Nagasaki (49% of total searches to Nagasaki Prefecture). The next most popular destinations are Sasebo (44%) and Shimabara (4%). Searches for hotels in Unzen (3%) are also popular.
KAYAK users have found double rooms in Nagasaki Prefecture for as cheap as $52 (Shimabara) in the last 3 days. The average price is $181.
In the last 72 hours, users have found Nagasaki Prefecture hotels for tonight for as low as $99 (Hirado). Users have also found 3-star hotels from $99 (Hirado).