Let KAYAK do the searching
Based on KAYAK hotel searches, the most popular destination is Ōtsu (70% of total searches to Shiga Prefecture). The next most popular destinations are Hikone (17%) and Moriyama (8%). Searches for hotels in Ōmihachiman (5%) are also popular.
KAYAK users have found double rooms in Shiga Prefecture for as cheap as $35 (Ōtsu) in the last 3 days. The average price is $150.