$93 Find Cheap Flights from Houston to Puerto Rico

This is the cheapest one-way flight price found by a KAYAK user in the last 72 hours by searching for a flight from Houston to Puerto Rico departing on 9/30. Fares are subject to change and may not be available on all flights or dates of travel. Click the price to replicate the search for this deal.
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Cheap Flights from Houston to Puerto Rico

Cheapest round-trip prices found by our users on KAYAK in the last 72 hours
Aguadilla
Aguadilla2 stops$245
Aguadilla
Aguadilla2 stops$245

Book Cheap Houston to Puerto Rico Plane Tickets

 
Here are some of the best deals found on KAYAK recently from the most popular airlines for round-trip flights from Houston to Puerto Rico that are departing in the next months. While these flights were available on KAYAK in the last 72 hours, prices and availability are subject to change and deals may expire.
Discover the best prices for you by selecting your travel dates on KAYAK.

Recent round-trip flight deals from Houston to Puerto Rico

Sun, Oct 12 - Tue, Oct 14
Spirit Airlines Logo
9:39 am - 2:59 pmIAH-SJU
4h 20mnonstop
Spirit Airlines Logo
2:49 am - 8:33 amSJU-IAH
6h 44m1 stop
$175Spirit Airlines
Find Deal
Sun, Oct 5 - Sun, Oct 12
Spirit Airlines Logo
9:39 am - 2:59 pmIAH-SJU
4h 20mnonstop
Spirit Airlines Logo
4:04 pm - 7:59 pmSJU-IAH
4h 55mnonstop
$176Spirit Airlines
Find Deal
Sun, Nov 9 - Wed, Nov 19
Spirit Airlines Logo
2:28 pm - 8:44 pmIAH-SJU
4h 16mnonstop
Spirit Airlines Logo
4:41 pm - 7:41 pmSJU-IAH
5h 00mnonstop
$178Spirit Airlines
Find Deal
Tue, Sep 23 - Fri, Sep 26
Delta Logo
5:45 am - 4:31 pmIAH-SJU
9h 46m1 stop
Delta Logo
12:58 pm - 9:03 pmSJU-IAH
9h 05m1 stop
$185Delta
Find Deal
Wed, Oct 29 - Tue, Nov 4
American Airlines Logo
7:25 am - 6:25 pmIAH-SJU
10h 00m1 stop
American Airlines Logo
2:47 pm - 12:47 amSJU-IAH
12h 00m1 stop
$195American Airlines
Find Deal
Sat, Nov 1 - Wed, Nov 5
American Airlines Logo
6:19 pm - 12:05 pmIAH-SJU
16h 46m1 stop
American Airlines Logo
7:00 am - 7:24 pmSJU-IAH
14h 24m1 stop
$215American Airlines
Find Deal
Wed, Sep 24 - Wed, Oct 1
Frontier Logo
4:36 pm - 2:34 amIAH-SJU
8h 58m1 stop
Frontier Logo
9:26 pm - 5:01 pmSJU-IAH
20h 35m2 stops
$238Frontier
Find Deal
Tue, Sep 30 - Mon, Oct 20
United Airlines Logo
7:20 am - 11:09 pmIAH-BQN
14h 49m2 stops
United Airlines Logo
12:15 am - 6:12 amBQN-IAH
30h 57m2 stops
$539United Airlines
Find Deal
Tue, Sep 30 - Mon, Oct 20
United Airlines Logo
10:57 am - 11:09 pmIAH-BQN
11h 12m1 stop
United Airlines Logo
12:15 am - 10:40 amBQN-IAH
11h 25m1 stop
$558United Airlines
Find Deal
Sun, Dec 14 - Sat, Jan 3
Frontier Logo
12:28 pm - 11:02 amIAH-BQN
20h 34m1 stop
Frontier Logo
3:55 am - 4:41 pmBQN-IAH
14h 46m2 stops
$702Frontier
Find Deal
Booking Insights

KAYAK's insights & trends for Houston to Puerto Rico flights

Get data-powered insights and trends into flights from Houston to Puerto Rico to help you find the cheapest flights, the best time to fly and much more.

What is the cheapest Houston George Bush Intcntl Airport to Puerto Rico flight route?

Data is based on round-trip flight searches on KAYAK over the past month.

The cheapest ticket to Puerto Rico from Houston George Bush Intcntl Airport found in the last 72 hours was to San Juan, at $106 round-trip. The most popular route is from Houston George Bush Intcntl Airport (IAH) to San Juan Luis Munoz Marin Intl Airport (SJU), and the cheapest round-trip airline ticket found on this route in the last 72 hours was $106.

Can I save money by flying with a layover from Houston George Bush Intcntl Airport to Puerto Rico?

The average round-trip price for all non-stop flights, flights with one layover, and flights with two layovers for the route found by users searching on KAYAK in the last 2 weeks.

No, with an average price for the route of $395, prices are generally cheapest when you fly direct.

What is the cheapest month to fly from Houston George Bush Intcntl Airport to Puerto Rico?

To calculate monthly average prices, KAYAK takes all prices for each month over the last year for round-trip flights from Houston George Bush Intcntl Airport to Puerto Rico, removes the top 0.1% to account for outliers, and then takes the median of all values for each month.

The cheapest month for flights from Houston George Bush Intcntl Airport to Puerto Rico is October, when tickets cost $270 (return) on average. On the other hand, the most expensive months are December and June, when the average cost of round-trip tickets is $495 and $396 respectively.

What’s the cheapest day of the week to fly from Houston to Puerto Rico?

The average price of all round-trip flights from Houston George Bush Intcntl Airport to Puerto Rico clicked on KAYAK for each day over the last 12 months.

When flying from Houston to Puerto Rico, you should consider leaving on a Tuesday and avoid Fridays if you are looking for the best rates. For your return to Houston, you’ll find the best rates on Saturdays and the most expensive ones on Sundays.

How far in advance should I book a flight from Houston George Bush Intcntl Airport to Puerto Rico?

To calculate weekly average prices, KAYAK takes all prices for each week before departure over the last year for round-trip flights from Houston George Bush Intcntl Airport to Puerto Rico, removes the top 0.1% to account for outliers, and then takes the average of all the values for each week.

To get a below average price on the flight from Houston George Bush Intcntl Airport to Puerto Rico, you should book around 2 weeks before departure, which saves you about 26% compared to booking last minute. For the absolute cheapest price, our data suggests you should book 5 weeks before departure.

Good to know

Low seasonSeptember
Cheapest flight$93
Best time to beat the crowds but there is an average 9% increase in price.
Most popular time to fly with an average 40% increase in price.
Flight from Houston George Bush Airport to San Juan

FAQs - booking Puerto Rico flights

  • Which airlines fly nonstop to Puerto Rico from Houston?

    You can book nonstop flights to Puerto Rico from Houston with only one airline, United Airlines. Other airlines, such as Frontier Airlines and Spirit Airlines, offer one-stop flights to Puerto Rico with a layover at Orlando (MCO), Philadelphia (PHL), or Tampa (TPA). United Airlines offers several daily direct flights from IAH to SJU. Flights to other airports in Puerto Rico include at least one stopover en route and take about 4h15min.

  • How do I get to George Bush Intercontinental Airport for my flight to Puerto Rico?

    You can use public transport to get to the airport from the city center without worrying about parking and traffic. The Metro bus is a popular means to the airport from the city center because it is affordable. BUSH IAH Express 102, which runs every 15 to 30 minutes, is a direct bus that takes you straight to Terminal C of IAH in about an hour. You can also use a taxi or rideshare like Uber, which is much faster.

  • What can I do during a layover at San Juan Airport?

    Thanks to the handful of amenities at the airport, you’ll find plenty to keep you busy at SJU. Take a breather while enjoying snacks and drinks at the lounges in Terminals A and C. Terminals C and D also have chapels where you can pray. The airport has more than 30 restaurants where you can enjoy a meal during your layover. Duty-free stores and souvenir kiosks are also available if you want to do some shopping.

  • Is there public transportation from San Juan Airport to the city center?

    Yes, public transport is available from San Juan Airport to the city center. San Juan city center is about 13 miles away, and the bus is the only reliable public transportation. Buses D53 and T5 run approximately every 30 minutes every day of the week. They take you from either Terminal A or B of the airport to the Terminal Covadonga in the city center. A one-way bus ticket from the airport to the city center will cost you about $0.75, making the bus the most affordable method of transportation. Large luggage is not allowed onboard these buses.

  • How does KAYAK find such low prices on flights from Houston to Puerto Rico?

    KAYAK is a travel search engine. That means we look across the web to find the best prices we can find for our users. With over 2 billion flight queries processed yearly, we are able to display a variety of prices and options on flights from Houston to Puerto Rico.

  • How does KAYAK's flight Price Forecast tool help me choose the right time to buy my flight ticket from Houston to Puerto Rico?

    KAYAK’s flight Price Forecast tool uses historical data to determine whether the price for a flight from Houston to Puerto Rico is likely to change within 7 days, so travelers know whether to wait or book now.

  • What is the Hacker Fare option on flights from Houston to Puerto Rico?

    Hacker Fares allow you to combine one-way tickets in order to save you money over a traditional round-trip ticket. You could then fly from Houston to Puerto Rico with an airline and back with another airline.

  • What is KAYAK's "flexible dates" feature and why should I care when looking for a flight from Houston to Puerto Rico?

    Sometimes travel dates aren't set in stone. If your preferred travel dates have some wiggle room, flexible dates will show you all the options when flying from Houston to Puerto Rico up to 3 days before/after your preferred dates. You can then pick the flights that suit you best.

  • What is the cheapest time of day to fly to Puerto Rico?

    The cheapest time of day to fly to Puerto Rico is generally in the afternoon, when round-trip flights cost $239 on average. Morning departures are around 7% more expensive than evening flights, on average. The most expensive time of day to fly to Puerto Rico is generally at night, which is peak travel time and where the average cost of a ticket is $503.

Top tips for finding cheap flights to Puerto Rico

  • George Bush Intercontinental Airport (IAH) serves flights to Puerto Rico from Houston. Terminal C handles direct and non-direct airlines flying to Puerto Rico from IAH.
  • If you’re not a fan of eating during a flight, IAH terminals have a variety of fast food and restaurant options where you can eat before you board your flight.
  • San Juan Airport (SJU) in Puerto Rico serves cities like San Juan, Toa Baja, Vega Alta and Trujillo Alto. Meanwhile, cities like Aguadilla, Aguada, Moca, Isabela, and Rincon are served by Aguadilla Airport (BQN).
  • Travelers should be aware that they will undergo a biometric facial comparison process when they arrive in Puerto Rico. The law requires all airports in Puerto Rico to verify the identity of every traveler.
  • US citizens only need to present valid ID to enter Puerto Rico. A passport or visa is not necessary because Puerto Rico is a territory of the US.

Reviews of the top 5 airlines serving from Houston to Puerto Rico

 
Need help choosing which airline to fly with from Houston to Puerto Rico? KAYAK airline reviews give an overall score for each airline based on loads of factors, including comfort, boarding, in-flight entertainment and more, to make your decision easier. See airline scores according to verified KAYAK customer reviews.
7.9
DeltaOverall score based on 7959 reviews
7.3Food
8.2Boarding
8.5Crew
7.9Comfort
7.9Entertainment
Airline reviews

Perfect flight both ways. On time, courteous staff, plane comfortable and cool. Best domestic flights I’ve had in awhile.

10.0 ExcellentAnonymous, Sep 2025CLT - BOS
Read more Delta reviews

Perfect flight both ways. On time, courteous staff, plane comfortable and cool. Best domestic flights I’ve had in awhile.

The food was terrible especially for a 15 hour international flight. The crew was unpleasant as well.

Really low quality food especially for an international flight. The crew also was surprisingly unpleasant except couple of ladies. I know we were not in first class but that’s no reason to treat customers as less.

Flight delayed for two and half hours and then canceled altogether due to mechanical issues. No mechanic onsite to fix so had to send one from LAX.

Quick check in. Everything went smooth. I don't know what can be done about airline food.

Crew was good. The reservation got mixed up and they didn't have my TSA number. I am also a Silver Medallion and wasn't able to use Sky Priority.

Delta made it easy, comfortable and timely. The crew was fantastic.

This route with Delta always has delays or is cancelled. Aircrafts seem smaller and older. I fly Delta quite a bit - haven’t had issues with the international flights. But this route has always been the troublesome one

Nothing special. The crew never went out of their way for anything.

Three seats in first class were broken and while they were able to still acommodate us it was looking very touch and go and they had others they could not acommodate

The newer screen was super cool and had the option to watch many different shows or movies. Crew was polite and helpful. However again, many children screaming bloody murder and kicking my seat, and parents doing nothing about it as usual.

Plane was crowded and even when we hit altitude, the plane was hot, not enough air flow.

Flight was delayed and missed my connection Lufthansa didn’t respond.

the delay for 3 hours was understandable due to weather conditions but the flight should’ve provided some on flight compensations or at least provide more food.

United could have one single once of customer service. No human United employee would help me with the invalid mileage plus number, they said I had to speak with the computer.

Overall it was good. I missed my connection but I was put on another flight.

Although the flight was delayed the crew and the flight itself were very good. Couldn't fault anything and after the disappointment of being abandoned in the US by BA it was a welcome relief to travel with United

Boarding experience was smooth. Flight attendants were friendly and helpful. Entertainment system on the Houston-Edmonton flight did not function for passengers on the left side of the aisle. On the bird's eye flight from Quito to Houston, they should not serve a meal. No one needs to eat after midnight and it is disturbing for those passengers trying to sleep.

Smooth flight. Boarding was chaotic. Could not hear the gate agent over the intercom. People were lined up in the wrong lines. Groups one and two were told to board through line one and group 3 through line 2. All very confusing. Once in the air, the flight was smooth. There was no entertainment option on this aircraft, even though it was a larger aircraft.

My suitcase was completed destroyed. The top part is broken and unusable now.

American airlines suck they delay the flights all the time made me sleep in an airport because my flight was delayed and I miss my connecting flight

There's nothing I liked about it. For first off I scheduled this trip two weeks in advance then they delayed my flight which messed up my whole trip. So I scheduled it for the following weekend thinking there won't be a delay and guess what as soon as I got to the airport we said in the airplane on the tarmac for an hour and a half. Not only was it delayed I missed my connecting flight meaning I had to stay the night at Dallas-Fort Worth airport sleeping on the floor. I will tell you this I will never fly American airlines ever again I have had nothing but horrible experience with them and I just throw money at them

The stewardess hit me with the food kart twice on the head and didn't say I'm sorry once. The same stewardess gave me a warm Apple Juice with No ice. The Flight was delayed for Departure 6 times, starting from 2:36pm, finally taking off 7:50pm. I was late picking up my child from the sitter by 3 hours.

Our bags took a long time to get unloaded once we landed.

My flight was delayed for several hours. Sitting at gate 16 for several hours, I got a text from Kayak the gate changed to 9 before it was announced. Very bad communication at each gate from American Airlines employees. I received 10 notifications of delay from Kayak. My vacation started off horrible! I will write to American Airlines corporate office also.

My Internet did not work for Outlook email or basically anything. I paid for one hour of in-flight usage and it was terrible. I spent a lot of time on different sites and browsers with no luck and a lot of frustration. Other than that, the flight was on time, crew was nice, service was fine. Seat was OK even though I paid for the extra 6 inches. I cannot imagine how tight the seats in the back must be.

Delayed flight that lead to a missed connection and a 5-hour trip became a 12-hour flight 🙄

No issues. They did change our gate FOUR times in about 30 minutes which was mildly annoying but the flight was fine.

Great flight. No issues at all. I still think boarding could be more efficient but otherwise, a good experience.

Crew should be nicer and emphatic with customers. Same cookies as the past 20 years. Seat are ok and the plane was clean though it was delayed.

Spirit is low fare air line. Food also cost you. No free food.

Everyone was kind for the most part. I did travel with children and paid for seats and even then it was not as suitable. I tried calling their customer service prior to check in and I was told they couldn't help me because I didn't purchase my tickets with them.

I think the staff was nice. They took time to explain safety protocols. Boarding was great. They started early and our flight left a little early which was convenient. Having free games to play would have been better

Just total easy flight experience!! What could you do better..? Hmmm..? There was nothing I can remember. Spirit was a far more comfortable and easy process than American, United & Delta. I'll always look for Spirit and I've told a few people about, since flying this past trip!! I'm a SPIRIT FAN!! Thank You, SPIRIT AIRLINES!! Very, VERY well done, 100%!! See you...SOON!! -Best, Linda R.

The flight was 3.5 hrs delayed. I was not notified prior to arriving to the airport via spirit app. or via boarding pass that I already had loaded on my phone. The agent that i saw at the counter didn’t mention anything about the delay either. I only saw the update after logging in to my email account.

Better than my las vagas experience, but still dissapointed with the airline support service.

Unfortunately, spirits crew had us boarding and parking the plane often, would wait long periods of time before allowing the people attending the flight on the plane to know what was going on this caused for my plane to not only get diverted but then canceled at an airport 2 hours away and basically stranded with charter buses MAYBE being hired. I was left with no choice but to stay overnight and use a comp room in Altantic City to then arrive home the next day. This trip was the first time seeing my partner since he joined the Air Force and this stressful ride caused unwarranted tears on what was supposed to be an east flight home. I understand weather is unpredictable but to have passengers deboard to then reboard an hour later to taxi on the runway for another hour to then basically leave an entire fight stranded. I waited almost 30 minutes at the airport and not one employee could tell me about a charter bus so I had to leave and make accommodations to stay overnight and get a ride home.

Great! We boarded on time! Everything went so smoothly! The flight was so smooth

Seats uncomfortable, hard to check luggage, etc. It was like the last flight out of Hanoi

I will never fly with Spirit again. I was late getting through TSA after dealing with traffic and getting on the wrong shuttle. I got to the gate 2 minutes before the ticket said the gate closes and they agents were gone and doors were closed. They rescheduled my flight for 12 hours later and the agent had the nerve to tell me, “Be on time next time”. I was already upset from nothing going right for me that morning. I booked another flight through Alaska Airlines and they were very accommodating, nerer again Spirit Airlines!!!!

Seats were new and comfortable. Staff was fine. Missed my connection due to weather -which wasn’t their fault- but got no help at all. Gate staff sent me to customer service, which was and stayed unstaffed. Sign with QR code directed me to call or chat. Chat was useless. Call was returned after an hour. No itinerary offered by Frontier could get me home in less than 30 hours. Rebooked with another airline and got a partial refund that came to about 10 percent of what I paid to get home.

Finally a Frontier on time and efficient. I've had problems before with your airline, but this time everything went fine.

The experience was good. No frills but I got there safe and sound and on time.

Great for the price. No wifi or entertainment, but gate agents and crew were fantastic and we boarded quickly and left on time.

sluggish boarding and arrival procedures, fake nice flight attendants, and lots of delays.

Disaster. They lied every step of the way. We ended up being delayed due to crew and then allegedly abandoned the flight because of a curfew at LGA. No rebooking to LGA at any reasonable time. No hotel. No meal vouchers. Had to sleep in the airport and fly to Newark instead. Will never fly Frontier again.

What I expected, nickeled and dined and a frontier flight attendant loudly complained about her job and lack of communication as she headed to the gate on her cell phone. Not professional.

As every law enforcement agency I could imagine surrounded the plane and we didn’t disembark for 2 hours and then had to stick around for another hour to go get our personal belongings after leaving them behind and being bused away from the plane, it was scary and inconvenient. We were given no information as to why this was happening. Lack of communication with passengers was disappointing.

After boarding and un-boarding twice over 6+hours, the flight was canceled.

Severe turbulence. Captain never came on to reassure passengers after things settled down.

Everything you need to know for your flight from Houston to Puerto Rico

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