$74 Find Cheap Flights from Jacksonville to Puerto Rico - Compare and Save

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Cheap Flights from Jacksonville to Puerto Rico

Cheapest round-trip prices found by our users on KAYAK in the last 5 days
Sort by: Cheapest
San Juan
3h 07mNonstop
from $181per person
Aguadilla
6h 51m2 stops
from $347per person
Booking Insights

Price, demand and travel trends for Jacksonville to Puerto Rico flights

Use KAYAK data on prices, travel dates, airlines and seasonal trends to compare options and book flights with more confidence.

Are flights from Jacksonville to Puerto Rico cheaper or more expensive than last year?

Fares from Jacksonville to Puerto Rico are running about 7% lower than they were around this time last year, averaging $291 round-trip.

What are the cheapest fares from Jacksonville to Puerto Rico right now?

The cheapest fares from Jacksonville to Puerto Rico on KAYAK in the last week were to San Juan Luis Munoz Marin Intl (SJU) from $181 round-trip, and to Aguadilla Borinquen (BQN) from $347 round-trip.

What’s the cheapest month to fly from Jacksonville to Puerto Rico?

September is the cheapest time of year to fly, with average fares of $242. Prices are highest in December, when average flight costs increase to around $390.

When is the best time to book flights from Jacksonville to Puerto Rico?

Book your flights 6 weeks before your trip. KAYAK data collected over the past 12 months shows that booking in this window can save you around 17% compared to booking last-minute (within 2 weeks of departure).

Which airport in Puerto Rico is the cheapest to fly to from Jacksonville?

Based on KAYAK data from the past 12 months, the cheapest airports to fly into Puerto Rico are:

• San Juan Luis Munoz Marin Intl (SJU) from $295
• Aguadilla Borinquen (BQN) from $492

What’s the cheapest day to fly from Jacksonville to Puerto Rico?

Monday tends to be the cheapest day to fly from Jacksonville to Puerto Rico, while Thursday is the most expensive. Fares run about 10% higher that day, based on the past 12 months of KAYAK data.

What's the cheapest time of day to fly from Jacksonville to Puerto Rico?

Data from the past 12 months shows it's cheapest to fly to Puerto Rico during the morning with average prices of $292. The night is the most expensive time to fly, with average prices of $370.

Key details for Jacksonville to Puerto Rico flights

Low season

February

Cheapest flight

$74
Beat the crowds with an average 69% drop in travelers.
The most popular month to fly with an average 90% increase in travelers.
One-way flight from Jacksonville to San Juan Luis Munoz Marin Intl Airport

Your Jacksonville to Puerto Rico flight questions, answered

Find helpful answers about this route, including flight times, airports, airlines and booking tips.

  • Is now a good time to book a flight from Jacksonville to Puerto Rico?

    Yes. Fares from Jacksonville to Puerto Rico are low right now. As a rule of thumb, a round-trip under $238 (cheaper than most fares this year) is a good deal, so if you spot one at or below that, it's a good time to book.

  • How much should I budget for a flight from Jacksonville to Puerto Rico?

    Over the past 12 months, round-trip fares from Jacksonville to Puerto Rico have ranged from $238 to $381.

  • What are the main airports serving Puerto Rico?

    Flights to Puerto Rico use two main airports, San Juan Luis Munoz Marin Intl (SJU) and Aguadilla Borinquen (BQN).

  • What airlines fly nonstop from Jacksonville to Puerto Rico?

    Based on the flight schedule for the next 3 months, 2 airlines offer nonstop flights on this route:

    • JetBlue
    • Frontier

  • Where in Puerto Rico can I fly nonstop from Jacksonville?

    Based on the flight schedule for the next 3 months, you can only fly nonstop from Jacksonville to San Juan.

  • Is it cheaper to fly with a layover from Jacksonville to Puerto Rico?

    No, nonstop flights from Jacksonville to Puerto Rico are typically the cheaper option, averaging $282 over the past 12 months.

  • How long is a flight from Jacksonville to Puerto Rico?

    Flights from Jacksonville to Puerto Rico take 3h 02m on average.

  • Which cabin classes are available on flights from Jacksonville to Puerto Rico?

    On flights from Jacksonville to Puerto Rico you can book Economy Class, Premium Economy Class, Business Class or First Class.

  • What are some popular landmarks in Puerto Rico?

    KAYAK travelers' favorite landmarks in Puerto Rico include:

    • Viejo San Juan
    • Condado Beach
    • Puerto Rico Convention Center
    • Ocean Park

  • What are the earliest and latest flights from Jacksonville to Puerto Rico?

    The earliest nonstop flight from Jacksonville to Puerto Rico departs at 10:44 am and the latest departs at 9:01 pm. Nonstop flights take about 3h 02m.

  • Where can one find a prayer room at JAX?

    A meditation room is available between ticketing and the pre-security courtyard. Here you can have a prayer session before departing from the airport. Everyone can use the room regardless of their religion. This helps you socialize with people from different religious backgrounds.

  • Where can one grab a meal at JAX?

    The DoubleTree hotel is available within the airport and it has a restaurant. You can walk or take a free shuttle. Here, you can get varied types of delicacies. They are affordable to all guests regardless of the flight you have booked. You can also have a drink before departing.

  • Are there shops are SJU?

    Yes. Shops and stores are available at the airport. They are located at the main terminal. Some shops and stores include Casa, Enrique Tomas, and Dufry Shops. You can stop by to buy some things you might need during your stay at the airport.

  • Does BQN offer facilities to the disabled?

    Yes. The airport offers special assistance to travelers with physical challenges. You are free to contact the airline before your day of arrival for them to organize the necessary facilities like the wheelchair. This enables you easily access the airport on landing and move from one location to the other. If you need assistance, the airport also provides the same.

Your guide to booking Jacksonville to Puerto Rico flights

Get tips on when to book, when to fly and what to know before your trip.
  • If you can plan ahead, the sweet spot for booking your flight is 6 weeks before your trip. KAYAK data shows fares in this window are around 17% lower than last-minute bookings (made within 2 weeks of departure). Not ready to commit? Set a Price Alert and we'll let you know when prices change.
  • If your travel dates are flexible, book your trip for September when flights are typically cheapest and avoid December when prices are at their highest.
  • Flying on Monday is usually the cheapest. Flights on Thursday cost about 10% more on average, so being flexible with your travel dates could help you save.
  • If you're looking to save, San Juan Luis Munoz Marin Intl (SJU) is the cheapest airport to fly into from Jacksonville. If you have onward travel, don't forget to factor in the cost of your journey by train, bus or domestic flight.
  • Start your trip in San Juan, which is the most popular destination in Puerto Rico. From there, it's easy to continue on to other popular destinations such as Carolina, Fajardo and Rio Grande.
  • Whether you're trying to save time or money, the Jacksonville to Puerto Rico nonstop route is usually your best option.
  • Jacksonville Airport (JAX) offers the best facilities to lactating mothers. It has baby care facilities. A lactating suite is near the food court. You can breastfeed your baby without any interference. A comfortable chair is available. You can pump milk for your baby before leaving the airport.
  • JAX is the most suitable for corporate travelers. There is a business center located within the airport. The spacious room is available for you to rent. It has executive chairs, board-style tables, and a computer hook-up. There is internet that allows you to connect with other partners who are not within the airport. You can also have a teleconference showing your full video.
  • JAX has lounges. Airline lounges are available for members only and at Concourse A. Military lounges are also available for US military and their families. It is located at the main terminal on the first floor. It is free of charge. You can rest as you wait for the departure time of your flight.
  • San Juan Airport (SJU) in Puerto Rico has a restaurant where you can have a meal. It is located in the Luis Munoz Marin Airport terminals. Fast food is available for the arriving travelers who are in a hurry. There is a food store where you can get all your food. They are available at a pocket-friendly price to all arriving travelers.
  • Borinquen Airport (BQN) in Puerto Rico offers car rental services to arriving travelers. Several car rental companies are located within the airport. The companies include Avis, Hertz, Sixt, Thrifty, and Budget. You can book the car online to avoid inconvenience once you arrive at the airport. This saves you the stress of looking for a means of transport to reach your destination.

Reviews of the top 4 airlines serving from Jacksonville to Puerto Rico

 
Need help choosing which airline to fly with from Jacksonville to Puerto Rico? KAYAK airline reviews give an overall score for each airline based on loads of factors, including comfort, boarding, in-flight entertainment and more, to make your decision easier. See airline scores according to verified KAYAK customer reviews.
7.8
DeltaOverall score based on 8632 reviews
7.8Entertainment
7.2Food
8.5Crew
8.1Boarding
7.8Comfort
Airline reviews

Everything was great. The only thing that wasn’t was the breakfast calzone which was basically warm bread. It was very tasteless and wasn’t good at all

10.0 ExcellentTimothy, Oct 2026
Read more Delta reviews

Everything was great. The only thing that wasn’t was the breakfast calzone which was basically warm bread. It was very tasteless and wasn’t good at all

I usually like delta. However this is my second flight that the wifi does not work

Both legs on the way were smaller planes, each had a mechanical issue causing a delay

Aside from a completely packed plane, I really have no complaints.

The flight was very good and the staff was very friendly and helpful!

We landed and sat on the tarmac for 45 minutes because they only have one gate at the airport and there was another plane running late so we had to wait

The food is terrible. The staff is wonderful. Comfort is good.

Excellent check-in. Crew was good. Excellent communication from flight deck.

Amazing flight! I have never noticed the uniforms of the attendants before in twenty years of flying except today when one female had the most amazing dress on. It was beautifully designed and showed she was in charge. I never dreamed I would google who designed Delta uniforms . The ultimate compliment is when another woman admires your outfit. . I hope your designer puts it on the market

Flight was on time, the staff was personable & professional, & the plane arrived on time.

Every thing went smooth. No complaints except deplaning could have been quicker

I was grossly overcharged to change my return flight. Had to do it through Kayak because it was booked that way and I was not given the fare price listed at the time on JetBlue or kayak. Was traveling with another couple that booked directly through JetBlue and they paid the $100 change fee and the difference between what they paid originally(same as me) and the displayed fares and it was less than $400 total for two tickets. I paid almost $700 to change the same fare tickets they purchased and had to pay again for upgraded seat selection that I previously paid for on top of the almost $700 increase. Difficult to talk to the kayak representative because of his accent. Told me I had to wait for confirmation to be sure it had been changed and that I could take up to a few hours. The call itself after the wait time took almost 30 minutes, which could’ve been done directly on JetBlue in 2 to 3 minutes.. My husband and I were given separate boarding zones. They would not let us board together. I had to board in the last zone. They made me check my bag even though my husband told me that he had a spot to put my carry-on. Since he boarded before me. The flight crew tried to accommodate, but the woman that was boarding in the terminal came down and would not let me take my carry-on. She was aggressive, rude and condescending to everybody in line and told them she was being audited. When I told her that my husband had secured a spot for me to put my carry-on with his backpack, that would then move to under the seat. She told me that she couldn’t play favorites, although I was second to last to board the plane since my boarding zone was changed. They told me because I forwarded my husband his ticket that’s what separated our boarding zones, but would not allow us to board together. The volume on my TV would not work, and my upgraded seat would not go into the fully upright position so I was told repeatedly during takeoff and landing to put my chair into the upright position which was embarrassing and uncomfortable to be told assertively so many times. I will not book through kayak again.

I propose enhancing the legroom across the entire cabin seating area and expanding the snack selection. The airline companies should prioritize customer needs over the extravagant and unjustified salaries of upper management.

KUDOS TO ALL THE CREW PROVIDING ASSISTANCE WITH PASSENGERS ON A WHEELCHAIR. ON BOTH FLIGHTS THEY HUSTLED TO TAKE MY RELATIVE TO CONNECTION ON TIME. THEY DESERVE A LOT OF CREDIT!

My original flight was cancelled. My replacement flight was delayed over 2 hours. I lost my whole day in NY

Delays were crazy long (over an hour) both for boarding and baggage claim

The flight out was delayed from 3:40pm to 5pm and again to 8pm. We boarded after 5pm, had to disembark because they could not get the Engine started, then we switched gates and got a new plane and did not board until after 8pm.

Very well organized both boarding and deplaning. Very satisfied with the service I received.

Flight was on time arrived at the destination 10min early they kept in touch via email

at the time for boarding the lady just call Group A and no other goups and everybody from A to F go inside without the right turn,and when we get in theres no more spsce for carry on , the ones that get in at not correct group from the back occupy our space !!!!! a mess !!!!

Flight was delayed due to maintenance issue. Missed my connecting flight. Got rebooked in a middle seat when I had a first class ticket.

Awful. Original flight was delayed 5 hours. Had to to take a connecting flight instead of direct. Had a 4 hour layover. I missed all of my morning meetings getting in 5 hours later than I was supposed to and had to change to take a later flight the next day to get them back in which cia time another $150.

It was very difficult to stretch my knee out and I am very short. I also had a torn tendon in my knee which made it extra uncomfortable anyways. My husband is 6'2" and I can't imagine him flying in that plane.

The plane was broken so we had to change planes.

I was late from Jacksonville, FL but the limited interaction I had with the Philly crew was great.

Uncomfortable seats and flight attendant was rude as she insisted on waking up my husband to ask him if he wanted a drink. When he said that he was sleeping, she replied “without an attitude “. He was seated at 8c

Airlines must do something with overweight people... Maybe reserve a business class seat for them, or you could pay the consequences if someone overweight seat side by side to you in economy.

Delayed 4 hours from Charlotte to Nashville. Could have driven there faster. Information provided by AA was sparse.

Gate change was a little tough but it was a good flight otherwise

Great flight, great service but most of all- our luggage made the trip with us.,

Flight delayed 9 hours. On tarmac for over an hour after arrival. Will never book with Frontier under any circumstances ever again.

When I was boarding my departure from Raleigh to Orlando I was inappropriately scolded by a female dog named Mia because I didn’t pay in advance for my carry on bag ($75). Frontiers website is confusing regarding pre-paying for carryons so it was a simple mistake. I also had paid for “upfront plus” meaning me and my son were seated in the front row with no one in the middle seat ($450 upgrade). When we were boarding Mia said “sir, you didn’t pay for your carryon” in a not so polite tone and told me to get out of line and come back to the counter to pay for my carryon. The way they had the retractable rope left me no room to circle back without making the people behind me move so I just stood there and then she said a second time “sir!! Go pay for your carryon” in an embarrassing tone. I then moved their rope so I could get back to the counter when a second female dog then asked “are you done!?!?” because I had said “do you want me to bulldoze the people behind me?” I then said you do realize I paid over $400 for upfront plus so I was certainly not trying to sneak a carryon bag without paying. Long story short, I am soooo done with discount airlines!!! By the time you pay for all the “extras” you might as well have paid for Delta Southwest or American! Frontier airlines sucks and I was embarrassed by a female dog named Mia!!!

Frontier feels like a family I Worked for Eastern Airlines back in the day and I felt the family vibe that I had then. Thank you

It was an early flight and most people napped/slept and the crew let us which was nice.

It didn’t happen. I booked it and then was told it wasn’t available and then forced to pay far higher prices for a worse option

This company socks. It's fraud. They canceled our flight yesterday, and today we were late because of a really long line at the check in bag. At the rebook station, there was ton of people. The workers were all rude. I am gonna make a report to FTC.

Flight got delayed for 5 hours no good explanation was offered ;(

There was no one at the counter to assist with our check in. The app didn’t work, so I arrived at the airport with time to check in and I couldn’t because no employees were there. When I finally got someone on the phone, it was inside the 60min rule and they said I could no longer check in and they could sell me another ticket. We had to scramble and pay an additional $800 for tickets and THEN AFTER (about 60 min from my original convo with customer service and 10min after original departure time) I had boarded my new flight, there was email saying my original flight from Frontier was delayed and leaving 2hr 50min later, but I STILL wouldn’t have been able to check in. Which means customer service should have been able to see it and let me check in because I was well within my check in time. When I call Frontier, they hang up on me. So their app didn’t work and they employees left and they take zero responsibility or assistance with their “customer service”

Frontier notifying me earlier of flight delay of over 2 hours.

Good for the price. My only complaint is that the pilot should keep the air flowing while passengers are waiting to getting out of airplane.

More options for your flight from Jacksonville to Puerto Rico

Complete your trip to Puerto Rico with a hotel stay or car rental