BOI - JNU

$401 Find Cheap Flights from Boise to Juneau - Compare and Save

1 adult
1 adult, Economy, 0 bags

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Everything you should know

Cheapest round-trip
$784
Typical prices: $604-$862
Alaska Airlines
Sat 1/6Mon 1/8
BOI - JNU • 1 stop
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Booking Insights
Flight Deals

Cheap Flights from Boise to Juneau (BOI-JNU)

 
Discover the best prices for you by selecting your travel dates on KAYAK.

Recent round-trip flight deals from Boise to Juneau

Wed, Jan 6 - Fri, Jan 8
Alaska Airlines Logo
5:58 pm - 1:18 pmBOI  Boise Air Term. Gowen Fld-JNU Juneau Intl
21h 20m1 stop Seattle/Tacoma Intl
Alaska Airlines Logo
9:40 am - 10:23 amJNU  Juneau Intl-BOI Boise Air Term. Gowen Fld
22h 43m3 stops Sitka Ketchikan Seattle/Tacoma Intl
$784Alaska Airlines
Wed, Jan 6 - Fri, Jan 8
Alaska Airlines Logo
8:24 pm - 1:18 pmBOI  Boise Air Term. Gowen Fld-JNU Juneau Intl
18h 54m2 stops Portland Seattle/Tacoma Intl
Alaska Airlines Logo
9:40 am - 10:23 amJNU  Juneau Intl-BOI Boise Air Term. Gowen Fld
22h 43m3 stops Sitka Ketchikan Seattle/Tacoma Intl
$787Alaska Airlines
Wed, Jan 6 - Fri, Jan 8
Alaska Airlines Logo
8:57 am - 12:28 amBOI  Boise Air Term. Gowen Fld-JNU Juneau Intl
17h 31m2 stops Portland Seattle/Tacoma Intl
Alaska Airlines Logo
6:33 pm - 10:23 amJNU  Juneau Intl-BOI Boise Air Term. Gowen Fld
13h 50m1 stop Seattle/Tacoma Intl
$820Alaska Airlines
Wed, Mar 10 - Sat, Mar 13
Alaska Airlines Logo
2:44 pm - 12:28 amBOI  Boise Air Term. Gowen Fld-JNU Juneau Intl
11h 44m2 stops Spokane Seattle/Tacoma Intl
Alaska Airlines Logo
9:20 am - 12:11 amJNU  Juneau Intl-BOI Boise Air Term. Gowen Fld
12h 51m1 stop Seattle/Tacoma Intl
$824Alaska Airlines
Wed, Jan 6 - Fri, Jan 8
Alaska Airlines Logo
3:39 pm - 12:28 amBOI  Boise Air Term. Gowen Fld-JNU Juneau Intl
10h 49m2 stops Portland Seattle/Tacoma Intl
Alaska Airlines Logo
7:08 am - 2:20 pmJNU  Juneau Intl-BOI Boise Air Term. Gowen Fld
5h 12m1 stop Seattle/Tacoma Intl
$849Alaska Airlines
Wed, Jan 6 - Fri, Jan 8
Alaska Airlines Logo
11:10 am - 9:36 pmBOI  Boise Air Term. Gowen Fld-JNU Juneau Intl
12h 26m1 stop Seattle/Tacoma Intl
Alaska Airlines Logo
7:08 am - 8:04 pmJNU  Juneau Intl-BOI Boise Air Term. Gowen Fld
10h 56m2 stops Seattle/Tacoma Intl Portland
$859Alaska Airlines
Wed, Mar 10 - Sat, Mar 13
Alaska Airlines Logo
6:00 am - 1:18 pmBOI  Boise Air Term. Gowen Fld-JNU Juneau Intl
9h 18m1 stop Seattle/Tacoma Intl
Alaska Airlines Logo
7:08 am - 4:11 pmJNU  Juneau Intl-BOI Boise Air Term. Gowen Fld
7h 03m1 stop Seattle/Tacoma Intl
$867Alaska Airlines
Wed, Mar 10 - Sat, Mar 13
Alaska Airlines Logo
9:53 am - 7:53 pmBOI  Boise Air Term. Gowen Fld-JNU Juneau Intl
12h 00m3 stops Seattle/Tacoma Intl Ketchikan Sitka
Alaska Airlines Logo
9:20 am - 12:11 amJNU  Juneau Intl-BOI Boise Air Term. Gowen Fld
12h 51m3 stops Sitka Ketchikan Seattle/Tacoma Intl
$872Alaska Airlines
Wed, Jan 6 - Fri, Jan 8
Alaska Airlines Logo
3:01 pm - 12:28 amBOI  Boise Air Term. Gowen Fld-JNU Juneau Intl
11h 27m1 stop Seattle/Tacoma Intl
Alaska Airlines Logo
7:08 am - 4:20 pmJNU  Juneau Intl-BOI Boise Air Term. Gowen Fld
7h 12m1 stop Seattle/Tacoma Intl
$916Alaska Airlines
Sat, Nov 7 - Wed, Nov 11
Alaska Airlines Logo
12:49 pm - 9:28 pmBOI  Boise Air Term. Gowen Fld-JNU Juneau Intl
10h 39m2 stops Seattle/Tacoma Intl Ketchikan
Alaska Airlines Logo
9:57 am - 8:02 pmJNU  Juneau Intl-BOI Boise Air Term. Gowen Fld
8h 05m1 stop Seattle/Tacoma Intl
$998Alaska Airlines
Booking Insights

Price, demand and travel trends for Boise to Juneau flights

Use KAYAK data on prices, travel dates, airlines and seasonal trends to compare options and book flights with more confidence.

How much is a round-trip flight from Boise to Juneau?

Round-trip flights from Boise to Juneau typically range from $604 to $862. The lowest price found in the past 5 days was $784, on Alaska Airlines.

Find deals

Key details for Boise to Juneau flights

Cheapest flight

$401
One-way flight from Boise to Juneau

When to book flights from Boise to Juneau

Are your dates flexible? Find out the best times to travel from Boise to Juneau based on our flight data from the last year. Discover the cheapest month and even day to fly.
Estimated round-trip price

Your Boise to Juneau flight questions, answered

Find helpful answers about this route, including flight times, airports, airlines and booking tips.

  • What cabin classes can I book on flights from Boise to Juneau?

    Only Economy Class is available on flights from Boise to Juneau.

  • Do I need a passport to fly from Boise to Juneau?

    No, a passport is not required for this domestic route, but you will need a real ID-compliant driver's license, a state ID or another TSA-accepted form of identification.

  • Have flight prices from Boise to Juneau changed much recently?

    Yes. Based on fares seen in the past 5 days, round-trip prices on this route varied from about $784 to $1,060. That means the highest observed fare was about 35% higher than the lowest one.

  • What car rental options are available at Juneau Intl Airport (JNU)?

    Juneau Intl Airport (JNU) hosts 5 major car rental companies, with daily rates starting from around $36 for economy cars. Top options include:

    • Budget
    • Avis
    • Hertz
    • Alamo
    • Enterprise Rent-A-Car

  • Which airports can I use when flying from Boise to Juneau?

    Flights from Boise to Juneau usually depart from Boise Air Term. Gowen Fld (BOI) and arrive at Juneau Intl (JNU).

  • Which airports do connecting flights from Boise to Juneau pass through?

    Most connecting flights from Boise to Juneau pass through Seattle/Tacoma Intl (SEA), which handles 100% of one-stop traffic on this route.

  • Can I save money by using flexible dates for flights from Boise to Juneau?

    Yes. Flexible dates can save you up to 66% on flights from Boise to Juneau. Friday is the cheapest departure day at $544 round-trip on average, while Tuesday is the most expensive at $1,586, a difference of $1,042.

    KAYAK's flexible dates feature shows options up to 3 days before and after your selected dates, making it easier to compare nearby fares.

  • What is the time difference between Boise and Juneau?

    Juneau is 2 hours behind Boise (Alaska Time vs Mountain Time). Plan for the time shift when scheduling connections or first-day activities.

Your guide to booking Boise to Juneau flights

Get tips on when to book, when to fly and what to know before your trip.
  • If your dates are flexible, aim for a Friday departure and avoid flying on Tuesday. On this route, Friday flights average $544, about $1,042 less than Tuesday fares (66% savings) based on the last 12 months.
  • If you're arriving late at night and need somewhere to stay, check out these hotels close to Juneau Intl Airport.

    • Travelodge by Wyndham Juneau
    • Frontier Suites Hotel in Juneau
    • Aspen Suites Hotel Juneau

More options for your flight from Boise to Juneau

Complete your trip to Juneau with a hotel stay or car rental

Car rentals in Juneau
Hotels in Juneau
Vacations in Juneau