MSO - JNU

$489 Find Cheap Flights from Missoula to Juneau

This is the cheapest round-trip flight price found by a KAYAK user in the last 72 hours by searching for a flight from Missoula to Juneau departing on 2/6. Fares are subject to change and may not be available on all flights or dates of travel. Click the price to replicate the search for this deal.
1 adult
1 adult, Economy, 0 bags

KAYAK searches hundreds of travel sites at once for deals on flights to Juneau

 
These are the airlines KAYAK users have selected most often from within our search results in flight searches from Missoula to Juneau, as well as popular online travel agencies
These are the airlines KAYAK users have selected most often from within our search results in flight searches from Missoula to Juneau, as well as popular online travel agencies
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Everything you should know

Cheapest round-trip
$489
Alaska Airlines
Fri 2/6Mon 2/9
MSO - JNU • 3 stops
Cheapest one-way
Multiple Airlines
Tue 12/16
MSO - JNU • multi-stop
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We hope you love your trip to Juneau!
Flight Deals
Booking Insights
Flight Deals

Cheap Flights from Missoula to Juneau (MSO-JNU)

 
Here are some of the best deals found on KAYAK recently from the most popular airlines for round-trip flights from Missoula to Juneau that are departing in the next months. While these flights were available on KAYAK in the last 72 hours, prices and availability are subject to change and deals may expire.
Discover the best prices for you by selecting your travel dates on KAYAK.

Recent round-trip flight deals from Missoula to Juneau

Fri, Feb 6 - Mon, Feb 9
Alaska Airlines Logo
6:23 am - 6:45 am
MSO
-
JNU
26h 22m3 stops
Alaska Airlines Logo
9:47 am - 11:55 pm
JNU
-
MSO
12h 08m3 stops
$489Alaska Airlines
Fri, Feb 6 - Mon, Feb 9
Alaska Airlines Logo
6:23 am - 1:24 pm
MSO
-
JNU
9h 01m1 stop
Alaska Airlines Logo
7:20 am - 11:55 pm
JNU
-
MSO
14h 35m2 stops
$494Alaska Airlines
Fri, Feb 6 - Mon, Feb 9
Alaska Airlines Logo
6:23 am - 1:24 pm
MSO
-
JNU
9h 01m1 stop
Alaska Airlines Logo
7:00 am - 3:31 pm
JNU
-
MSO
6h 31m1 stop
$499Alaska Airlines
Booking Insights

KAYAK's insights & trends for Missoula to Juneau flights

Get data-powered insights and trends into flights from Missoula to Juneau to help you find the cheapest flights, the best time to fly and much more.

Which airlines fly non-stop between Missoula and Juneau?

Airline and price data is aggregated from results in KAYAK’s search results from the last 2 weeks for round-trip flights from Missoula to Juneau.

There is just one airline that flies from Missoula to Juneau direct and that is Alaska Airlines. The best round-trip deal found from Alaska Airlines for the route is $454.

Find deals

Good to know

Cheapest flight$489
Flight from Missoula to Juneau

When to book flights from Missoula to Juneau

Are your dates flexible? Find out the best times to travel from Missoula to Juneau based on our flight data from the last year. Discover the cheapest month and even day to fly.
Estimated round-trip price
KAYAK looks at all historical flight data for each date to provide a predicted price for one-way trips or round-trips with a duration up to 40 days. While we try to provide actual minimum prices for each date, some prices are predictions and actual prices may differ.

FAQs for booking flights from Missoula to Juneau

  • What is the cheapest flight from Missoula to Juneau?

    In the last 3 days, the lowest price for a flight from Missoula to Juneau was $489 for a round-trip ticket.

  • Do I need a passport to fly between Missoula and Juneau?

    No

  • Which aircraft models fly most regularly from Missoula to Juneau?

    We unfortunately don’t have that data for this specific route.

  • Which airline alliances offer flights from Missoula to Juneau?

    oneworld is the only airline alliance operating flights between Missoula and Juneau.

  • How does KAYAK find such low prices on flights from Missoula to Juneau?

    KAYAK is a travel search engine. That means we look across the web to find the best prices we can find for our users. With over 2 billion flight queries processed yearly, we are able to display a variety of prices and options on flights from Missoula to Juneau.

  • How does KAYAK's flight Price Forecast tool help me choose the right time to buy my flight ticket from Missoula to Juneau?

    KAYAK’s flight Price Forecast tool uses historical data to determine whether the price for a flight to Juneau from Missoula is likely to change within 7 days, so travelers know whether to wait or book now.

  • What is the Hacker Fare option on flights from Missoula to Juneau?

    Hacker Fares allow you to combine one-way tickets in order to save you money over a traditional round-trip ticket. You could then fly to Juneau with an airline and back to Missoula with another airline. Booking your flights between Missoula and JNU can sometimes prove cheaper using this method.

  • What is KAYAK's "flexible dates" feature and why should I care when looking for a flight from Missoula to Juneau?

    Sometimes travel dates aren't set in stone. If your preferred travel dates have some wiggle room, flexible dates will show you all the options when flying to Juneau from Missoula up to 3 days before/after your preferred dates. You can then pick the flights that suit you best.

Reviews of the top airline flying from Missoula to Juneau

 
See real verified KAYAK customer reviews for airlines flying from Missoula to Juneau. Airline scores are aggregated from all reviews left by passengers on KAYAK after flying with an airline. KAYAK doesn’t show reviews that are older than 5 years. Learn how KAYAK collects reviews.
Need help choosing which airline to fly with from Missoula to Juneau? KAYAK airline reviews give an overall score for each airline based on loads of factors, including comfort, boarding, in-flight entertainment and more, to make your decision easier. See airline scores according to verified KAYAK customer reviews.
8.0
Alaska AirlinesOverall score based on 11469 reviews
7.0Entertainment
8.1Boarding
7.1Food
7.8Comfort
8.5Crew
Airline reviews

I liked that the crew was friendly, we left and arrived at near scheduled times, plenty of on-board crew to handle the cabin service for the flight and I found the price of my airline ticket to be excellent!

10.0 ExcellentAnonymous, Nov 2025
BIL - PDX
Read more Alaska Airlines reviews

I liked that the crew was friendly, we left and arrived at near scheduled times, plenty of on-board crew to handle the cabin service for the flight and I found the price of my airline ticket to be excellent!

Had no way to see what gate came in on or what gate connecting flight would take off.

The small ej plane didn’t have any entertainment aside from the stuff on the Alaska website that has to be accessed from your own device. But everything else was just great.

The flight attendants were friendly. I liked that I got a mini soda can, not just a small cup. No issues with our flight departure, etc.

My wife and I had seats next to each other, but when our boarding passes were printed, British Airways had moved me away from her and refused to fix it. We tried to fix it at the boarding gate and were just told flatly "no". Never again.

Great if it’s not a long flight in coach.

The flight ran out of snacks before any was offered to me. Otherwise the flight was good.

Flight was delayed about 40 minutes by a mechanical problem. This made a long day even longer. Otherwise good.

After we boarded there was quite a long time before we actually took off, and there were no announcements from crew about why we were delayed. Later when they did make announcements they were largely inaudible. There was no food (other than for purchase) on the flight and no entertainment. Thats not a complaint, just explaining my ratings in those categories. The flight was smooth. Baggage claim was rapid.

Flight attendant missed us first pass with beverage. We had to ask for water on second pass as we were going to be missed again.

Everything you need to know for your flight from Missoula to Juneau

Information on your arrival and departure airports

Missoula (MSO)
Juneau (JNU)