$46 Find Cheap Flights from New York to Puerto Rico

This is the cheapest one-way flight price found by a KAYAK user in the last 72 hours by searching for a flight from New York to Puerto Rico departing on 9/17. Fares are subject to change and may not be available on all flights or dates of travel. Click the price to replicate the search for this deal.
1 adult
1 adult, Economy

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Best Puerto Rico Flight Deals from New York

Cheapest round-trip prices found by our users on KAYAK in the last 72 hours
Aguadilla
Aguadilla1 stop$225
Mayagüez
Mayagüez1 stop$408
Aguadilla
Aguadilla1 stop$225
Mayagüez
Mayagüez1 stop$408

Cheap Flights from New York to Puerto Rico

 
Here are some of the best deals found on KAYAK recently from the most popular airlines for round-trip flights from New York to Puerto Rico that are departing in the next months. While these flights were available on KAYAK in the last 72 hours, prices and availability are subject to change and deals may expire.
Discover the best prices for you by selecting your travel dates on KAYAK.

Recent round-trip flight deals from New York to Puerto Rico

Mon, Aug 4 - Thu, Aug 7
Spirit Airlines Logo
7:00 pm - 11:00 pmEWR-SJU
4h 00mnonstop
Spirit Airlines Logo
11:59 pm - 4:11 amSJU-EWR
4h 12mnonstop
$132Spirit Airlines
Find Deal
Mon, Jul 14 - Fri, Jul 25
Spirit Airlines Logo
7:00 pm - 11:00 pmEWR-SJU
4h 00mnonstop
Spirit Airlines Logo
11:59 pm - 4:11 amSJU-EWR
4h 12mnonstop
$134Spirit Airlines
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Thu, Oct 23 - Mon, Oct 27
Frontier Logo
6:15 am - 2:15 pmJFK-SJU
8h 00m1 stop
Frontier Logo
9:39 pm - 10:25 amSJU-JFK
12h 46m1 stop
$136Frontier
Find Deal
Wed, Sep 3 - Mon, Sep 8
Frontier Logo
5:30 pm - 9:52 amLGA-SJU
16h 22m1 stop
Frontier Logo
3:16 pm - 11:31 pmSJU-LGA
8h 15m1 stop
$137Frontier
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Fri, Oct 31 - Wed, Nov 5
United Airlines Logo
8:15 am - 9:22 pmLGA-SJU
13h 07m2 stops
United Airlines Logo
5:50 pm - 11:30 pmSJU-LGA
6h 40m1 stop
$165United Airlines
Find Deal
Wed, Jul 23 - Fri, Aug 1
JetBlue Logo
7:20 pm - 11:34 pmJFK-SJU
4h 14mnonstop
JetBlue Logo
6:00 am - 9:59 amSJU-JFK
3h 59mnonstop
$166JetBlue
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Mon, Jul 14 - Fri, Aug 1
JetBlue Logo
7:20 pm - 11:34 pmJFK-SJU
4h 14mnonstop
JetBlue Logo
6:00 am - 9:59 amSJU-JFK
3h 59mnonstop
$171JetBlue
Find Deal
Sun, Jul 13 - Thu, Jul 17
American Airlines Logo
6:30 am - 11:55 pmJFK-SJU
17h 25m1 stop
American Airlines Logo
5:20 pm - 12:45 amSJU-JFK
7h 25m1 stop
$175American Airlines
Find Deal
Mon, Jul 14 - Fri, Jul 18
American Airlines Logo
7:00 pm - 5:06 amLGA-SJU
10h 06m1 stop
American Airlines Logo
7:54 am - 11:45 pmSJU-LGA
15h 51m1 stop
$175American Airlines
Find Deal
Sat, Sep 20 - Sat, Sep 27
United Airlines Logo
6:25 am - 2:44 pmLGA-SJU
8h 19m1 stop
United Airlines Logo
4:55 pm - 11:44 pmSJU-LGA
6h 49m1 stop
$193United Airlines
Find Deal
Useful Info

KAYAK's insights & trends for New York to Puerto Rico flights

Get data-powered insights and trends into flights from New York to Puerto Rico to help you find the cheapest flights, the best time to fly and much more.

What is the cheapest New York to Puerto Rico flight route?

The cheapest price for flight routes found by users searching on KAYAK in the last 2 weeks for round-trip flights from New York to Puerto Rico.

The cheapest ticket to Puerto Rico from New York found in the last 72 hours was to San Juan, at $143 round-trip. The most popular route is from New York John F Kennedy Intl Airport (JFK) to San Juan Luis Munoz Marin Intl Airport (SJU), and the cheapest round-trip airline ticket found on this route in the last 72 hours was $143.

Can I save money by flying with a layover from New York to Puerto Rico?

The average round-trip price for all non-stop flights, flights with one layover, and flights with two layovers for the route found by users searching on KAYAK in the last 2 weeks.

Yes, flying with a layover may cost you more time, but you can also save money on the route, with a 1 stop layover the cheapest option at $675 on average.

What is the cheapest month to fly from New York to Puerto Rico?

To calculate monthly average prices, KAYAK takes all prices for each month over the last year for round-trip flights from New York to Puerto Rico, removes the top 0.1% to account for outliers, and then takes the median of all values for each month.

The cheapest month for flights from New York to Puerto Rico is March, when tickets cost $196 (return) on average. On the other hand, the most expensive months are December and April, when the average cost of round-trip tickets is $396 and $327 respectively.

What’s the cheapest day of the week to fly from New York to Puerto Rico?

The average price of all round-trip flights from New York to Puerto Rico clicked on KAYAK for each day over the last 12 months.

If you are looking for a flight deal from New York to Puerto Rico, look for departures on Tuesdays and avoid leaving on a Thursday, as it's usually the priciest day. When flying back from Puerto Rico, Thursday is the cheapest day to fly and Sunday is the most expensive.

How far in advance should I book a flight from New York to Puerto Rico?

To calculate weekly average prices, KAYAK takes all prices for each week before departure over the last year for round-trip flights from New York to Puerto Rico, removes the top 0.1% to account for outliers, and then takes the average of all the values for each week.

To get a below average price on the flight from New York to Puerto Rico, you should book around 1 week before departure. For the absolute cheapest price, our data suggests you should book 4 weeks before departure.


Good to know

Low seasonSeptember
High seasonFebruary
Cheapest flight$46
Best time to beat the crowds with an average 34% drop in price.
Most popular time to fly with an average 20% increase in price.
Flight from New York LaGuardia Airport to San Juan Airport

FAQs - booking Puerto Rico flights

  • Since Puerto Rico is technically a part of the United States will I need a visa or a passport to travel there from New York?

    Because Puerto Rico is a territory of the United States, you will not need a passport nor a visa to travel here. Just as with any other location in the United States, you will need some sort of official identification to travel, such as a passport or a driver's license.

  • If I'm flying to the airport in San Juan, are there any public transportation choices to get me from the airport to the center of the city?

    While there are no public transportation options that can make the trip from the airport to the city center, there are two different shuttle companies that offer services. The cheapest of the two makes the trip in about 13min for a cost of around $22.

  • If my final destination in Puerto Rico is the amazing beaches of Culebra Island, what is the best way for me to travel there from New York?

    Start your trip by booking a one-stop flight from one of the New York airports to the airport in Culebra (CPX), most of which will have a short layover at San Juan Luis Munoz Marin International. Once at the airport in Culebra, you can catch a water taxi that will make the trip to the island in about 25min for a cost of around $55.

  • If somebody is going to drop me off at John F. Kennedy International Airport before my flight to Puerto Rico, where's the best place for them to drop me?

    The airport offers a Kiss and Fly lot. This lot is located right at the JFK AirTrain station so once you have said your goodbyes, you can hop aboard the train and make the short trip to the terminal buildings.

  • How does KAYAK find such low prices on flights from New York to Puerto Rico?

    KAYAK is a travel search engine. That means we look across the web to find the best prices we can find for our users. With over 2 billion flight queries processed yearly, we are able to display a variety of prices and options on flights from New York to Puerto Rico.

  • How does KAYAK's flight Price Forecast tool help me choose the right time to buy my flight ticket from New York to Puerto Rico?

    KAYAK’s flight Price Forecast tool uses historical data to determine whether the price for a flight from New York to Puerto Rico is likely to change within 7 days, so travelers know whether to wait or book now.

  • What is the Hacker Fare option on flights from New York to Puerto Rico?

    Hacker Fares allow you to combine one-way tickets in order to save you money over a traditional round-trip ticket. You could then fly from New York to Puerto Rico with an airline and back with another airline.

  • What is KAYAK's "flexible dates" feature and why should I care when looking for a flight from New York to Puerto Rico?

    Sometimes travel dates aren't set in stone. If your preferred travel dates have some wiggle room, flexible dates will show you all the options when flying from New York to Puerto Rico up to 3 days before/after your preferred dates. You can then pick the flights that suit you best.

  • What is the cheapest time of day to fly to Puerto Rico?

    The cheapest time of day to fly to Puerto Rico is generally in the afternoon, when round-trip flights cost $210 on average. Morning departures are around 3% cheaper than evening flights, on average. The most expensive time of day to fly to Puerto Rico is generally at night, which is peak travel time and where the average cost of a ticket is $326.

Top tips for finding cheap flights to Puerto Rico

  • While there are several international airports in Puerto Rico, the only ones that offer direct service from all three of the New York area airports are San Juan Luis Munoz Marin International (SJU) and Aguadilla Borinquen (BQN).
  • A good public transportation choice to get from Manhattan to New York La Guardia Airport (LGA) is to take the subway from the W. 4th St. Station to the Jackson Heights Station and then take the Q70 bus to the airport. The trip will take about 36min for a cost of around $2.
  • If you are driving yourself to Newark International Airport (EWR) before your flight to Puerto Rico, there are daily parking lots located on-site at the airport. A much more cost-friendly choice is to park at one of the off-site economy lots that offer free shuttle service to and from the terminal buildings.
  • If you are looking for a lounge to relax before your flight to Puerto Rico, John F. Kennedy International Airport (JFK) offers several lounge choices from airlines as well as pay-per-use lounges, such as The Wingtips Lounge and The Centurion Lounge.
  • If you have a disability and are flying from Newark International Airport, make sure that you use their Hidden Disabilities Sunflower Lanyard Program. When you wear this discrete lanyard, it lets airport staff know you may need a little extra help during your travels.

Reviews of the top 5 airlines serving from New York to Puerto Rico

 
Need help choosing which airline to fly with from New York to Puerto Rico? KAYAK airline reviews give an overall score for each airline based on loads of factors, including comfort, boarding, in-flight entertainment and more, to make your decision easier. See airline scores according to verified KAYAK customer reviews.
8.0
DeltaOverall score based on 7983 reviews
7.3Food
8.2Boarding
8.5Crew
7.9Entertainment
7.9Comfort
Airline reviews

Not a "Delta" issue, but a JFK issue: We booked a connecting flight with 3 1/2 hours between to clearn immigration and customs. Our inbound flight (BCN to JFK) was on the taxiway 45 minutes which ate into our layover time. Immigtration was insanely quick with the CBP MPC app; however, clearing TSA (again, after we were ALREADY cleared in Spain on the inbound international flight) took over 95 minutes. This left us with 10 minutes before boarding the connecting flight (JFK to SAN) to walk to the far end of Terminal 4 and try to find food. We didn't find any food that could promise to serve us in under 10 minutes so we boarded the Delta flight after coming off a plance and an 8-hour flight knowing that we wouldn't be served any food on the next 5 1/2 hour flight. I feel like Delta needs to put pressure on the JFK TSA to open more screening stations (by our count, we saw only 5 scanners open and a line of - as we said - over 90 minutes. The insult is that we WERE ALREADY SCREENED through TSA, but as you come off one flight into the USA, you have to go through the whole process again. It seems like if you have a connecting flight, there should be a way to pass through immigration and customs without needing to return through TSA.

4.0 OkayMathew, Jun 2025JFK - SAN
Read more Delta reviews

Not a "Delta" issue, but a JFK issue: We booked a connecting flight with 3 1/2 hours between to clearn immigration and customs. Our inbound flight (BCN to JFK) was on the taxiway 45 minutes which ate into our layover time. Immigtration was insanely quick with the CBP MPC app; however, clearing TSA (again, after we were ALREADY cleared in Spain on the inbound international flight) took over 95 minutes. This left us with 10 minutes before boarding the connecting flight (JFK to SAN) to walk to the far end of Terminal 4 and try to find food. We didn't find any food that could promise to serve us in under 10 minutes so we boarded the Delta flight after coming off a plance and an 8-hour flight knowing that we wouldn't be served any food on the next 5 1/2 hour flight. I feel like Delta needs to put pressure on the JFK TSA to open more screening stations (by our count, we saw only 5 scanners open and a line of - as we said - over 90 minutes. The insult is that we WERE ALREADY SCREENED through TSA, but as you come off one flight into the USA, you have to go through the whole process again. It seems like if you have a connecting flight, there should be a way to pass through immigration and customs without needing to return through TSA.

Overall, aside from the baggage issue, it was as good as one expects.

My flight was 6 pm 6/6. Every hour they delayed it again - air condition issues then no pilot then the crew had worked too many hours and cancelled the flight at 11 pm. Sent customers to NJ a 45 minutes uber ride to a hotel. Had to be back by 5 am for a 7 am flight and again no pilot etc with another three hours of delays.

The entertainment and wifi mostly didn't work on this flight.

Terrible entertainment system - kept freezing and audio kept cutting out. Snacks were mediocre at best for a 5 hour flight.

I am still upset that my bag was lost on a recent trip to Rome ; we were inconvenienced and out €150 Euros ; delta has refused to reimburse us

I am very bothered by the events today. I can't believe the flight attendants allowed someone to take my seat and made me move. It was embarrassing. I was in the right. The lady just didn't want move. I can't believe delta would allow this to stand and disrespect my rights as a passenger. The lady complained about her leg and that she couldn't move. Firstly somehow she was able to make it to row 24. Not sure how much her leg could have hurt. Secondly, I'm in plenty of pain myself. I just finished chemotherapy a several weeks ago. My body is constantly sore. Yet deltas flight attendants didn't appropriately protect my rights. In the end they found me a seat on the plane but I want to understand how delta can operate this way. They in essence allowed a bully to get their way.

Our bag was lost so that made unnecessary chaos On our trip

After a 5 hour delay waiting at the gate (3 delays adding up) with no clear reason provided, we finally boarded flew 3/4 of the way to Toronto then were turned back to New York. As we neared New York, the pilot declared that it was his fault, something to do with timing and him not being allowed into the country???? How could the airline let his happen? They had hours to prepare and make sure they had a crew available for the flight! We ended up in Toronto a day late with no sleep.

Terrible and im avoiding them in the future. My initial flight was delayed causing me to rebook my flight and when speaking with the representative to rebook I explained this is the second time my flights were delayed and they did nothing to help me. I wasn't booked to comfort plus or given a voucher or anything. I was almost late for my meeting that I needed to attend on Monday because of the games delta played delaying my flights even more and putting me in the very back of the plane next to an extremely intoxicated passenger

We love united ! We would like to acknowledge Aimee in the lounge near gate 130

Survey sent before we actually left. Delay after delay. Now a crew problem.

I love flying with United. Unfortunately, I flew on an older plane with minimal upgraded technology (no Bluetooth functionality or handy charging ports). Otherwise, the flight was great and even arrived early.

They changed my seats after I checked in and I was stressed from the time I saw that information until just before boarding, when the gate attendant fixed it, but it shouldn't have happened. And if it couldn't be prevented, then the people on the phone I spoke with should have done something to help, which they did not, nor did they offer me compensation, just meaningless apologies.

The flight was operated by Lufthansa. You can't expect much from them anymore. They have a talent in getting something wrong.

Terrible. Out flight was delayed for 21 (twenty one) hours. United is a joke.

Smooth flight, especially take off and landing, and great crew on board. Really loved the stroopwaffles!

Deplaning was delayed because of Jetbridge equipment issues in MKE, causing an issue on an otherwise great flight.

Not really their fault, but a 4.5 hour delay is pretty brutal

we were delayed going into and out of Newark Airport by 3-4 hours each way. Excuses/reasons given were misleading. Weather was cited at first when there was NO weather issue. Turns out Newark had a shortage of staff and runway construction. United knew this and should have NOT scheduled flights when they know we would be delayed so long. I will avoid United and EWR airport at all cost going forward. Delta never looked so good.

The flight departed more than 1 hour late. Leg room is bigger than most airlines

Excellent. Although they used to greet me as a mosaic member and provide a free drink, early boarding helps me to keep coming back to JetBlue.

No music app working: no economy meal on five hour flight; hour on tarmac at the end waiting for a gate. Flight itself was smooth and easy.

Communication with the customer and stay is important. Staff off with a minor inconvenience but it worked out of course. Also this was a very old Mint Class plane. They snuck this one in on us. The updated aircraft are much better.

The flight itself was fine, but the boarding process was extremely frustrating. There is no one scanning boarding passes - passengers just scan themselves and enter the jetway. By the time my husband and I got on the plane and were halfway to our seats they determined there were too many bags on the plane and everything at that point needed to be checked. This created a lot of unnecessary chaos. They should have alerted people before getting on the plane that they would need to start checking bags instead of waiting until people were already on the plane.

In flight on demand didn't work at our seats. Only a single beverage/snack run.

Traveling with JetBlue from NYC was convenient as accessing JFK airport was straightforward via the LIRR to the AirTrain. Maneuvering through the terminal was hassle-free, which was a pleasant start to the journey. However, the flight experience itself left much to be desired. The seating arrangement was notably uncomfortable; despite securing a window seat, space felt cramped. This was exacerbated by the middle seat passenger encroaching on my area, which made the flight less enjoyable. Additionally, while the in-flight entertainment system initially seemed like a reprieve, the sound outlet on my seat was inoperable. This issue turned what could have been a manageable three-hour flight into a rather tedious ordeal, as I was unable to use the entertainment system effectively. While JetBlue provided a smooth process in terms of airport logistics, the on-board experience highlighted areas in need of improvement, particularly in terms of comfort and entertainment system maintenance.

The flight crew that we had in our section may have been tired or something. I asked the flight attendant about my son’s screen not working and she spoke down to me like I was stupid. He still had no working screen throughout his flight. The other members had no personality and seemed like they were annoyed when you asked them for something. Definitely took a hit for simple things on my JB experience.

Over 2 hour delay for a 50-minute flight is unacceptable, especially in normal weather. Very poor communication via app

Kayak sent over to jet blue my account being Mike Callaghan instead of Michael. I have a jet blue account with Michael that was connected

Not very good because of an almost 3 hour delay for an hour long flight.

We had an almost 7 hour flight delay. We left the gate twice and taxi-ed and then returned the gate twice. Finally we got a new flight crew (our third one) and then left the gate to the final time before departing at 6:45pm (original flight time was 12pm). Out of Newark.

you guys canceled my flight last minute and lost my luggage.

Unprepared for the very expensive carry-on cost. Still was our best option since it was a direct flight and the best times.

My flight got cancelled by Spirit airlines, it was bad experience to me

It was a short fight and even though we had a delay due to weather we arrived on time

Flight was delayed a bit, but that was expected (and updated), so really not bad at all for the price. Could’ve used one less email asking me to upgrade my seat; otherwise no significant complaints

My experience was okay. The flight did not offer even water without a fee. Also had to pay extra for my carry on, as I was told I had to check my bag, even though it said I had the option to carry on a bag when booking. This costed me an extra $100. Would likely not fly with Spirit again.

Seats were comfortable but dont recline at all. Checkin online was easy but didnt provide a gate until last minute. Flight attendants were very unkind, not friendly and didnt go over safety procedures in case of a crash. No free snacks or beverages, not even water.

The booking was cancelled the next day. Spirit Airlines refunded Kayak cheapflay the full amount, but I was only refunded half. Costumer service is disgusting. Be careful. You can lose your money.

We’ve all seen the YouTube vids of out of control passengers. But this was an instance of a highly aggressive, bully flight attendant. Yelling in the face of a vet with PTSD who was texting their family. And no , we had not yet been instructed to put our phones in airplane mode. My suggestion is that you should pay whatever difference there is in order to avoid Frontier airlines. Additionally, after 3hrs trying to get customer service frontier offered a $25 voucher. I declined. This experience was so traumatic. To be verbally assaulted and abused by a flight attendant that has the power to say “boo” and I miss my flight ( which was to a family member’s funeral ). Frontier is unsafe and I cannot impress enough how much I discourage anyone ( esp those with any kind of disability like PTSD ) flying on Frontier.

My flight was delayed by two hours which made it so that I would miss my layover flight. I stood in line for customer service for over an hour and when I reached the agent she told me to scan a QR code and it'll give me options. I wasn't offered any help, guidance or compensation, only told that I have options but that I had to figure it all out myself. I was refunded part of the trip and had to buy an expensive same day ticket from another airline in order to get home. I will never fly Frontier again.

We were delayed three times ,and that destroyed my plans, and reservations

Very bad! No good service delayed my second connection flight

The confirmation # CK8GNW and my name was not recognized/in Frontier system. I was able to check in on Frintier app so i went to the Frontier ticket agent, at time they told me that my name/ confirmation did not show up as a purchased ticket. I had to purchase a new ticket that cost $289.00 one way.

Flight was late. Missed connecting in Denver. My new flight is more than 24 hours later and I have no room, vouchers, or compensation, and might also be bumped from the one tomorrow.

Frontier is terrible. Paid for exit row, not given exit row, refused to refund fee.

2 hour delay due to late plane, wrong size plane causing overbooking, and people getting off and on the plane after boarding was completed.

We had to wait in line over an hour just to check our bags. It's a good thing we were so early to the airport. Only one clerk was working and the line was around the corner and down the hall. No good. I felt bad for her. Not sure how she kept her sanity with all the upset people. Then we get to our gate and there is no seating. Everyone was standing. Then I realize it is not a gate at all, we still have to be shuttled to our airplane. Ugh. Then we were late taking off and missed a window of opportunity before the airport runways were shut down for some reason. (not frontier's fault the runway shut down.) The seats on the airline are crammed and there is no cushion. Never had a tighter seating arrangement while flying. My 6' 4" husband was absolutely miserable the whole time with knees digging in to the seat in front of him. You think you are getting a good deal on a ticket, and then wham! I had to pay 75 dollars for our checked bags and 75 dollars for a carry on. No other airline does that!!! And also, there is a 40 pound weight limit on checked bags... Would have been cheaper flying with another airline, and I would have at least gotten a snack and drink. Was thankful for the tiny cup of water at least.

This was one of the first frontier airline flights this spring that wasn't delayed. It actually left on time. Some of the flight crew did not look happy, they didn't smile when the passengers were boarding or getting off the plane, and the passengers initiated greetings, not the staff. To me this was an odd experience to have with any flight/airline. I had a bad experience booking this flight. The price didn't solidify until late hours into the night. Ever time I purchased the ticket, I either received a denial email or an error because the price has changed, but it was never reflected on the flyfrontier or kayak websites until way after midnight on the date of travel. This caused me anxiety and irritation with the websites. Then I noticed a mishap with my name on my voucher as I went to check in, it was incorrect. When I proceeded to correct it, Frontier had no easy, let alone free, way to remedy it. I couldn't correct my name without a $75 charge, I couldn't cancel my voucher to repurchase it with the correct name without a $100 charge, because it was too close to departure. Then calling frontier was nearly impossible to remedy the situation with a human. It's already difficult to want to choose frontier because of all the upcharges, but you feel kinda trapped into doing so because it's the more affordable airline.

Everything you need to know for your flight from New York to Puerto Rico

Cabin class types available on flights to Puerto Rico

Cabin classes available on flights to Puerto Rico. Prices are the lowest found on KAYAK over the last 7 days. Price and availability is not guaranteed.

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