SAN

$63 Find Cheap Flights from San Francisco Bay Area to San Diego

This is the cheapest one-way flight price found by a KAYAK user in the last 72 hours by searching for a flight to San Diego departing on 5/14. Fares are subject to change and may not be available on all flights or dates of travel. Click the price to replicate the search for this deal.
1 adult
1 adult, Economy, 0 bags

KAYAK searches hundreds of travel sites at once for deals on flights to San Diego

Travelers love KAYAK
41,299,237 searches in the past 7 days on KAYAK

Save 24% or moreCompare multiple travel sites with one search.

Track pricesNot ready to book? Create a price alert for when prices drop.

Bundle and saveSave money when you bundle your flight + hotel.

Filter your dealsChoose cabin class, free Wi-Fi and more.

Flight Deals
Useful Info
Flight Deals

Cheap Flights from San Francisco Bay Area to San Diego

 
Here are some of the best deals found on KAYAK recently from the most popular airlines for round-trip flights from San Francisco Bay Area to San Diego that are departing in the next months. While these flights were available on KAYAK in the last 72 hours, prices and availability are subject to change and deals may expire.
Discover the best prices for you by selecting your travel dates on KAYAK.

Recent round-trip flight deals from San Francisco Bay Area to San Diego

Wed, Jun 3 - Tue, Jun 30
Frontier Logo
10:45 pm - 8:47 am
SFO
-
SAN
10h 02m
1 stop
Frontier Logo
7:35 pm - 9:30 pm
SAN
-
SFO
1h 55mnonstop
$109Frontier
Thu, Jul 30 - Tue, Aug 4
Frontier Logo
10:22 pm - 11:58 pm
SFO
-
SAN
1h 36mnonstop
Frontier Logo
7:47 pm - 9:34 pm
SAN
-
SFO
1h 47mnonstop
$110Frontier
Fri, Jun 19 - Mon, Jun 22
Frontier Logo
10:27 pm - 12:15 am
SFO
-
SAN
1h 48mnonstop
Frontier Logo
7:35 pm - 9:30 pm
SAN
-
SFO
1h 55mnonstop
$111Frontier
Sat, Jun 13 - Wed, Jun 17
Multiple Airlines Logo
10:27 pm - 12:15 am
SFO
-
SAN
1h 48mnonstop
Multiple Airlines Logo
9:27 pm - 11:08 pm
SAN
-
SFO
1h 41mnonstop
$112Multiple Airlines
Fri, Jun 5 - Mon, Jun 8
Multiple Airlines Logo
10:01 pm - 11:44 pm
SFO
-
SAN
1h 43mnonstop
Multiple Airlines Logo
8:35 pm - 10:23 pm
SAN
-
SFO
1h 48mnonstop
$117Multiple Airlines
Wed, May 27 - Wed, May 27
Alaska Airlines Logo
7:06 am - 8:39 am
SJC
-
SAN
1h 33mnonstop
Alaska Airlines Logo
10:47 am - 12:22 pm
SAN
-
SJC
1h 35mnonstop
$132Alaska Airlines
Tue, Jun 9 - Tue, Jun 16
Alaska Airlines Logo
2:00 pm - 3:25 pm
SJC
-
SAN
1h 25mnonstop
Alaska Airlines Logo
10:24 pm - 11:54 pm
SAN
-
SJC
1h 30mnonstop
$137Alaska Airlines
Wed, May 27 - Wed, May 27
Southwest Logo
3:15 pm - 7:25 pm
SJC
-
SAN
4h 10m
1 stop
Southwest Logo
8:30 pm - 10:00 pm
SAN
-
SJC
1h 30mnonstop
$147Southwest
Tue, May 26 - Wed, May 27
Southwest Logo
4:10 pm - 5:40 pm
OAK
-
SAN
1h 30mnonstop
Southwest Logo
4:25 pm - 10:25 pm
SAN
-
OAK
6h 00m
1 stop
$147Southwest
Tue, May 26 - Sat, May 30
American Airlines Logo
4:20 pm - 9:34 pm
STS
-
SAN
5h 14m
1 stop
American Airlines Logo
6:25 am - 12:33 pm
SAN
-
STS
6h 08m
1 stop
$207American Airlines
Useful Info

Good to know

Low seasonJanuary
Cheapest flight$63
Best time to beat the crowds with an average 9% drop in price.
Most popular time to fly and prices are also 1% lower on average.
Flight from San Francisco to San Diego

Flights from San Francisco Bay Area to San Diego: the best tips from KAYAK users

Insights shared by verified travelers who flew the route from San Francisco Bay Area to San Diego 
PhilipFlew with Alaska Airlines
SFO
-
SAN
Feb 2026
Taking a flight with a smaller plane was pleasant, fewer passengers and.easier boarding and disembarking.
Verified travelerFlew with Alaska Airlines
STS
-
SAN
Jan 2026
If you want a better experience, fly non stop. American has a superior wireless connection experience. Delays appear to be the norm. Book two hours between flights minimum. Check your bags.
Verified travelerFlew with Alaska Airlines
STS
-
SAN
Oct 2024
An hour before flight was enough time for departing from Santa Rosa. (I doubt anyone is at the airport and working at 4:30am).
JamesFlew with Alaska Airlines
SJC
-
SAN
Jun 2024
It’s pretty simple there. It’s one of the better airports.TSA has never been a problem for me there it moves and is mostly efficient… I was happy that we didn’t have to takeoff our shoes, which surprised me. They’re always seems to be long walk to the gates coming and going not sure why that is
JoonwonFlew with Alaska Airlines
SJC
-
SAN
Apr 2024
The airplane is a quite small one, compared to the regular size, so pls be ready for some restrictions on carry on bags.

FAQs for booking flights from San Francisco Bay Area to San Diego

  • How does KAYAK find such low prices on flights from San Francisco Bay Area to San Diego?

    KAYAK is a travel search engine. That means we look across the web to find the best prices we can find for our users. With over 2 billion flight queries processed yearly, we are able to display a variety of prices and options on flights from San Francisco Bay Area to San Diego.

  • How does KAYAK's flight Price Forecast tool help me choose the right time to buy my flight ticket from San Francisco Bay Area to San Diego?

    KAYAK’s flight Price Forecast tool uses historical data to determine whether the price for a flight to San Diego from San Francisco Bay Area is likely to change within 7 days, so travelers know whether to wait or book now.

  • What is the Hacker Fare option on flights from San Francisco Bay Area to San Diego?

    Hacker Fares allow you to combine one-way tickets in order to save you money over a traditional round-trip ticket. You could then fly to San Diego with an airline and back to San Francisco Bay Area with another airline.

  • What is KAYAK's "flexible dates" feature and why should I care when looking for a flight from San Francisco Bay Area to San Diego?

    Sometimes travel dates aren't set in stone. If your preferred travel dates have some wiggle room, flexible dates will show you all the options when flying to San Diego from San Francisco Bay Area up to 3 days before/after your preferred dates. You can then pick the flights that suit you best.

Reviews of the top 5 airlines serving from San Francisco Bay Area to San Diego

 
Need help choosing which airline to fly with from San Francisco Bay Area to San Diego? KAYAK airline reviews give an overall score for each airline based on loads of factors, including comfort, boarding, in-flight entertainment and more, to make your decision easier. See airline scores according to verified KAYAK customer reviews.
7.9
Alaska AirlinesOverall score based on 12324 reviews
8.1Boarding
8.5Crew
7.1Food
7.8Comfort
7.0Entertainment
Airline reviews

The seat on the plane out was broken and would not lean back. I have back problems and sitting up straight was hard on my lower back and caused pain for over half the flight. Since I paid extra for First Class so I would not have these issues. This needs to be addressed.

6.0 GoodTerence, Apr 2026
TPA - SAN
Read more Alaska Airlines reviews

The seat on the plane out was broken and would not lean back. I have back problems and sitting up straight was hard on my lower back and caused pain for over half the flight. Since I paid extra for First Class so I would not have these issues. This needs to be addressed.

No headphones provided. No gf food. Only 1 beverage cart run sAN to HNL. Rarely saw crew members

A solidly good experience, but would’ve appreciated more communication with regards to travel delays.

No issues and clear sailing. What a preferred to have sat in one of empty seats other than my assigned seat that would be my only complaint if it was to complain.

Perpetually delayed, flight out was delayed almost 2 hours, flight home was delayed an hour and a half. On the way back no refreshments as an option, yet they gave it out to 1st class. No apology or notice of the delay going out both ways. Seats are nice feature wise, but the adjustable headrests don't stay up anymore. Feels more like a budget airline

Four hour delay. Missed our event. And they offered me $75. Absolutely shameful.

I have been flying commercial for decades. I was in one of the ladder boarding groups, had my bag tagged because they thought there was not going to be enough space for it in the overhead bins. I politely asked one of the attendance if I could try to find a space- she said I could and I did. I then took the bag tag off and gave it to one of the other attendants as I was told to do by the first one. He, in a curt, anal, and disrespectful manner, told me that I needed to take my bag down from the overhead bin and check it. This was a situation I’ve never encountered before. The attendant’s attitude was confrontational and belittling in front of other onlooking passengers as if daring me to challenge him. I am a physician who takes care of patients day in and day out. Not wanting to make a scene, I calmly told him, “do what you need to do.” he took my bag down from the overhead bin, put the back tag back on it, and checked it only to make room for another bag that was also supposed to be technically checked by a following passenger. The same male attendant later came up to me and said “you shouldn’t have showed me the bag tag,” as if conveying that he was just following protocol was a justification for treating me like a kid out of line. I cared about this because it took 15 minutes from my life to then retrieve the bag at baggage claim and it also felt like really poor customer service. I understand the need for protocols. This is also a service industry, and we the passengers are the clients. We should be made to feel welcome and respected and our life in transit made as easy as it can be within reason. This attendant clearly needs to be reminded of that. Of note, an older female fellow passenger sitting next to me agreed with this assessment.

The boarding process could be clearer, there's never a call for group f

good, no complaints but nothing to rave about. It was fine

I love Alaska! We arrived on the later side without seat assignments only to find the had oversold the flight by 1. The attendants worked extra hard to find a way for our party of 7 to stay together and we made it on the flight! Loved the free WiFi also!

Not having a five hour delay with little notice! The crew was very kind, though, and just as tired as we passengers were. The flight didn't depart until nearly 1 am...and no reason was ever given.

This leg was much better, but we did have to have a 3 hour lay o er after coming from a very exhausting hiccup with our flight from BNA to Den

The Air hostess were very rude on my flight from Houston to Austin . Their regular communication itself felt a they are shouting at people.

Boarding was easy. The seats are small and fairly uncomfortable

The problem with the seat assignments is that there were a lot of rows in the front that were empty but my row at the back was full. Just not so pleasant.

No food or entertainment, just a quick 40 minute flight. A little bumpy due to Santa Ana winds but pilot has no control over that. Good flight and landing!

Good but I prefer choose your own seat. With the new assigned seats they should board from the back I see no advantage to this new boarding. Just like every other airline

Mediocre. Boarding is now unpleasant. The employees, once friendly and nice, are now regularly speaking sternly to passengers, badgering them to do things right so they can take off on time and gate check bags because they don't have enough overhead bin space. The pretzel snack was crushed flat and broken into even smaller pieces, which happens frequently lately. Drink service was suspended before they reached my row.

The charges were ridiculous for an hour flight and the turbulence was very scary.

3 hour delay. Had to change plans and was still delayed.

Outstanding service, efficient & friendly crew, flight was safe, comfortable & on time

The crew was great. Very friendly and responsive. The plane was old, small and tight. We ran out of overhead space and I had to check. Middle seat was particularly tight.

The flight was delayed from take off because only one runway was operational in San Francisco.

Several missed and almost missed connections. It felt like everything was being patched together last minute without enough resources and it ended up being an extremely stressful experience that basically ruined our weekend on the west coast. What a waste.

Packed in plane small uncomfortable seats elbow to elbow nobody wants to be in that situation for the money they paid

Checking in united could not figure out my star alliance gold. Baggage did not get marked priority and didn't receive boarding passes. When got to SFO lounge personal fixed everything Immediately

Flight left on time, arrived early, pleasant staff provided water, coffee, etc. access to bathrooms was reasonable and were well maintained. blankets were available, lots of entertainment options. LUGGAGE SERVICE WAS GREAT. I got my one checked bag quickly and was able to make a bus connection for a 2 hour bus ride saving me from waiting another 1.5 hours.

Terrible, if possible won't be flying again anytime soon!

Wonderful in-seat entertainment with seatback screens and huge selection of quality movies. The ability to bluetooth connect headphones was amazing.

Horrible service no Wi-Fi connection on both leg of the flight and they are refusing to fix bad service

The airline cancel mi flight, lost a lot of money!!!

No WiFi, no outlets to charge phones, no complimentary beverages on a 6 hour flight

Flight was delayed more than 3 hours, and the metro had stopped running by the time we got to the terminal well past midnight, so I was stranded, alone, with no way to get home until the metro started up the next morning.

My flight was cancelled I missed time at work and got a parking ticket

Crew was very nice. Take off and landing were great. Economy seats are not comfortable. Extra cost for snacks.

The flight was delayed by 2 hours and we had no food or water or chargers

Horribly late because they had no crew!!! And then jet bridge didn’t work!! Then we arrived at a gate at lax miles away that we had to take a shuttle to a terminal!! I was over 3 hours late to getting the LA! Should have been here at 8:30 and at an appointment at 10:30 and arrived and left lax at 11 am!! Horrible experience!!!

Once again, the staff seem to think they are above the customers and treat everyone with disdain, belittling people.

Flight was canceled 8 hours before departure for lack of operational control and prepositioning of a plane. Then had the audacity to say it was because of weather, however there was no weather here in California or New Orleans or in between. It was the weather in Florida, Florida it had nothing to do with our flight path just the plane was supposed to fly us. 8 hours is more than enough time to move a plane anywhere in the US. That left me with a bill of 1200 dollars to re book a flight oh and kayaks insurance what a joke. Probably will never use kayak or spirit ever again terrible companies terrible customer service. I’ll also let everyone and anyone know this was an abomination and only for the customer. Also will be making a report to the DOT on bad business practices on behalf of kayak and spirit as well as the BBB. Do better, take care of your customers and don’t suck

The airplane had a strange noise that was constant throughout the flight. Thankfully I had noise-cancelling over-ear headphones that muted much of it.

They didn’t offer a water, even after I asked

Remind customers of the need to have passport or new ID for boarding.

The flight never took off and we spent 7 hours at the airport

Our flight was canceled. I will never use Kayak nor Frontier for travel again. The entire experience was a headache.

It was ok. It was expensive to check 2 bags ($75.00 per bag), and then it took a long time to wait for shuttle to take us from one terminal to the terminal where the plane was taking off at LAX. And all of this for a flight where we had to pay for any food or drink that was not water.

When I wanted to check in 3 hours prior to boarding time, the employees mentioned “a little over an hour delay” so I waited for an hour then I went to go look for food in the terminal and most people from that flight were in the same area looking for food. Finally I decided after food to check to see if it’s anytime closer and now it’s 2 mins until boarding closes?! What are you kidding me? I didn’t receive anything via sms about boarding now nor via email or on the intercom. I luckily made it through, barely, and then there’s no room for my carry on mind you I’m in the very first row so I had to place my purse in one further row back and my carry on sections down. Not sure who pays for better seats to get your stuff placed all over the plane but that was the worst experience I’ve ever had flying with anyone.

Terrible. The canceled my entire flight when I requested a refund for a trip frontier canceled trip one way.

i was unable to check in the flight. refund requested

I think Frontier was very good at communication. Their app worked very well. Loading was great and the flight was nice and easy.

This airline sucks. They offer low rates then charge you for everything, the app does not work well, the seats are the most uncomfortable. Maintenance issues on the flight, and you still have to sit through their credit card commercials. People are nice enough but does not make up for overall poor experience.

Traveling to a place near San Diego?

Book flights to San Diego if you plan to visit one of these locations
Julian
National City
Borrego Springs
Poway
Alpine
Lemon Grove
Santee

Everything you need to know for your flight to San Diego

Information on the airport you'll fly into in San Diego