SAN

$59 Find Cheap Flights from San Francisco Bay Area to San Diego

This is the cheapest one-way flight price found by a KAYAK user in the last 72 hours by searching for a flight to San Diego departing on 4/15. Fares are subject to change and may not be available on all flights or dates of travel. Click the price to replicate the search for this deal.
1 adult
1 adult, Economy, 0 bags

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Flight Deals

Cheap Flights from San Francisco Bay Area to San Diego

 
Here are some of the best deals found on KAYAK recently from the most popular airlines for round-trip flights from San Francisco Bay Area to San Diego that are departing in the next months. While these flights were available on KAYAK in the last 72 hours, prices and availability are subject to change and deals may expire.
Discover the best prices for you by selecting your travel dates on KAYAK.

Recent round-trip flight deals from San Francisco Bay Area to San Diego

Fri, May 1 - Fri, May 8
Frontier Logo
9:58 am - 11:40 am
SFO
-
SAN
1h 42mnonstop
Frontier Logo
7:18 pm - 9:19 pm
SAN
-
SFO
2h 01mnonstop
$115Frontier
Sun, May 10 - Tue, May 12
Frontier Logo
10:04 pm - 11:47 pm
SFO
-
SAN
1h 43mnonstop
Frontier Logo
6:44 pm - 8:36 pm
SAN
-
SFO
1h 52mnonstop
$116Frontier
Wed, Apr 22 - Thu, Apr 30
Alaska Airlines Logo
7:15 am - 8:55 am
SFO
-
SAN
1h 40mnonstop
Alaska Airlines Logo
9:12 pm - 11:01 pm
SAN
-
SFO
1h 49mnonstop
$117Alaska Airlines
Mon, Apr 20 - Thu, Apr 23
Frontier Logo
8:53 am - 5:56 pm
SFO
-
SAN
9h 03m
1 stop
Frontier Logo
9:19 am - 11:11 am
SAN
-
SFO
1h 52mnonstop
$118Frontier
Sat, May 9 - Mon, May 11
Frontier Logo
10:04 pm - 11:47 pm
SFO
-
SAN
1h 43mnonstop
Frontier Logo
10:07 pm - 10:41 am
SAN
-
SFO
12h 34m
1 stop
$119Frontier
Sat, May 9 - Mon, May 11
Frontier Logo
12:52 pm - 11:50 pm
SFO
-
SAN
10h 58m
1 stop
Frontier Logo
7:18 pm - 9:19 pm
SAN
-
SFO
2h 01mnonstop
$120Frontier
Wed, Apr 15 - Wed, Apr 22
Southwest Logo
1:20 pm - 8:30 pm
SFO
-
SAN
7h 10m
1 stop
Southwest Logo
1:00 pm - 7:55 pm
SAN
-
SFO
6h 55m
2 stops
$122Southwest
Wed, Apr 29 - Thu, May 7
Multiple Airlines Logo
7:15 am - 8:55 am
SFO
-
SAN
1h 40mnonstop
Multiple Airlines Logo
7:18 pm - 9:19 pm
SAN
-
SFO
2h 01mnonstop
$123Multiple Airlines
Tue, Apr 14 - Tue, Apr 21
Southwest Logo
12:05 pm - 6:15 pm
SJC
-
SAN
6h 10m
2 stops
Southwest Logo
5:30 pm - 6:55 pm
SAN
-
SJC
1h 25mnonstop
$132Southwest
Thu, Apr 30 - Thu, May 7
Alaska Airlines Logo
6:43 am - 8:15 am
SJC
-
SAN
1h 32mnonstop
Alaska Airlines Logo
8:00 am - 9:44 am
SAN
-
SJC
1h 44mnonstop
$135Alaska Airlines
Useful Info

Good to know

Low seasonJanuary
Cheapest flight$59
Best time to beat the crowds with an average 11% drop in price.
Most popular time to fly and prices are also 1% lower on average.
Flight from San Francisco to San Diego

Flights from San Francisco Bay Area to San Diego: the best tips from KAYAK users

Insights shared by verified travelers who flew the route from San Francisco Bay Area to San Diego 
PhilipFlew with Alaska Airlines
SFO
-
SAN
Feb 2026
Taking a flight with a smaller plane was pleasant, fewer passengers and.easier boarding and disembarking.
Verified travelerFlew with Alaska Airlines
STS
-
SAN
Jan 2026
If you want a better experience, fly non stop. American has a superior wireless connection experience. Delays appear to be the norm. Book two hours between flights minimum. Check your bags.
Verified travelerFlew with Alaska Airlines
STS
-
SAN
Oct 2024
An hour before flight was enough time for departing from Santa Rosa. (I doubt anyone is at the airport and working at 4:30am).
JamesFlew with Alaska Airlines
SJC
-
SAN
Jun 2024
It’s pretty simple there. It’s one of the better airports.TSA has never been a problem for me there it moves and is mostly efficient… I was happy that we didn’t have to takeoff our shoes, which surprised me. They’re always seems to be long walk to the gates coming and going not sure why that is
JoonwonFlew with Alaska Airlines
SJC
-
SAN
Apr 2024
The airplane is a quite small one, compared to the regular size, so pls be ready for some restrictions on carry on bags.

FAQs for booking flights from San Francisco Bay Area to San Diego

  • How does KAYAK find such low prices on flights from San Francisco Bay Area to San Diego?

    KAYAK is a travel search engine. That means we look across the web to find the best prices we can find for our users. With over 2 billion flight queries processed yearly, we are able to display a variety of prices and options on flights from San Francisco Bay Area to San Diego.

  • How does KAYAK's flight Price Forecast tool help me choose the right time to buy my flight ticket from San Francisco Bay Area to San Diego?

    KAYAK’s flight Price Forecast tool uses historical data to determine whether the price for a flight to San Diego from San Francisco Bay Area is likely to change within 7 days, so travelers know whether to wait or book now.

  • What is the Hacker Fare option on flights from San Francisco Bay Area to San Diego?

    Hacker Fares allow you to combine one-way tickets in order to save you money over a traditional round-trip ticket. You could then fly to San Diego with an airline and back to San Francisco Bay Area with another airline.

  • What is KAYAK's "flexible dates" feature and why should I care when looking for a flight from San Francisco Bay Area to San Diego?

    Sometimes travel dates aren't set in stone. If your preferred travel dates have some wiggle room, flexible dates will show you all the options when flying to San Diego from San Francisco Bay Area up to 3 days before/after your preferred dates. You can then pick the flights that suit you best.

Reviews of the top 5 airlines serving from San Francisco Bay Area to San Diego

 
Need help choosing which airline to fly with from San Francisco Bay Area to San Diego? KAYAK airline reviews give an overall score for each airline based on loads of factors, including comfort, boarding, in-flight entertainment and more, to make your decision easier. See airline scores according to verified KAYAK customer reviews.
8.0
SouthwestOverall score based on 4324 reviews
7.0Food
7.5Entertainment
8.0Comfort
8.6Crew
8.1Boarding
Airline reviews

Boarding was easy. The seats are small and fairly uncomfortable

8.0 ExcellentNicole, Mar 2026
LGB - OAK
Read more Southwest reviews

Boarding was easy. The seats are small and fairly uncomfortable

The problem with the seat assignments is that there were a lot of rows in the front that were empty but my row at the back was full. Just not so pleasant.

No food or entertainment, just a quick 40 minute flight. A little bumpy due to Santa Ana winds but pilot has no control over that. Good flight and landing!

Good but I prefer choose your own seat. With the new assigned seats they should board from the back I see no advantage to this new boarding. Just like every other airline

Mediocre. Boarding is now unpleasant. The employees, once friendly and nice, are now regularly speaking sternly to passengers, badgering them to do things right so they can take off on time and gate check bags because they don't have enough overhead bin space. The pretzel snack was crushed flat and broken into even smaller pieces, which happens frequently lately. Drink service was suspended before they reached my row.

The charges were ridiculous for an hour flight and the turbulence was very scary.

3 hour delay. Had to change plans and was still delayed.

The flight crew was extremely rude and especially not helpful when our flight was delayed.

The boarding and seat assignment system no longer works for me, but I know it is being replaced. Otherwise, I am good with the overall experience.

The lead steward kept singing about "San Francisco" and hotel California---more annoying than humorous....needs work. Flight was smooth and on time.

Four hour delay. Missed our event. And they offered me $75. Absolutely shameful.

I have been flying commercial for decades. I was in one of the ladder boarding groups, had my bag tagged because they thought there was not going to be enough space for it in the overhead bins. I politely asked one of the attendance if I could try to find a space- she said I could and I did. I then took the bag tag off and gave it to one of the other attendants as I was told to do by the first one. He, in a curt, anal, and disrespectful manner, told me that I needed to take my bag down from the overhead bin and check it. This was a situation I’ve never encountered before. The attendant’s attitude was confrontational and belittling in front of other onlooking passengers as if daring me to challenge him. I am a physician who takes care of patients day in and day out. Not wanting to make a scene, I calmly told him, “do what you need to do.” he took my bag down from the overhead bin, put the back tag back on it, and checked it only to make room for another bag that was also supposed to be technically checked by a following passenger. The same male attendant later came up to me and said “you shouldn’t have showed me the bag tag,” as if conveying that he was just following protocol was a justification for treating me like a kid out of line. I cared about this because it took 15 minutes from my life to then retrieve the bag at baggage claim and it also felt like really poor customer service. I understand the need for protocols. This is also a service industry, and we the passengers are the clients. We should be made to feel welcome and respected and our life in transit made as easy as it can be within reason. This attendant clearly needs to be reminded of that. Of note, an older female fellow passenger sitting next to me agreed with this assessment.

The boarding process could be clearer, there's never a call for group f

good, no complaints but nothing to rave about. It was fine

I love Alaska! We arrived on the later side without seat assignments only to find the had oversold the flight by 1. The attendants worked extra hard to find a way for our party of 7 to stay together and we made it on the flight! Loved the free WiFi also!

The he whole flight was very smooth on every aspects.

Flight cancelled and deplaned. Rescheduled 8 hours later at a different airport. Ended up at destination but late.

Due to plane delays on both legs of my flight home, I had to be rerouted from Santa Rosa to Las Vegas on Skywest and then to DCA on American. SkyWest airlines sat on runway in Las Vegas for 20 minutes waiting for gate to clear. My boarding pass for American that I was given by Alaska was incomplete and the Las Vegas airport lacked signage and departure boards. I barely made my flight bc it was so confusing. American Airlines has a much better wireless connection. I’ll never fly Alaska again. It clearly has problems.

We left about 30 minutes late due to ramp issues. It did not impact me, but I know others on the flight had very tight connections to Maui.

The crew was very friendly. Boarding was quick and efficient.

Flight delayed for more than 16 hrs and no effort was spent to provide an alternate

Overall we had a good experience during our flight from San Francisco to Houston.

it was a very short flight so my expectations were low.

Very disappointing given gate agent behavior. Filed a formal complaint with United.

Flight delayed. WiFi connectivity very poor if not existant. Last minute arrival forced me to run to catch my connection.

The power at the seat didn't work and the seat itself was difficult to adjust - this was a business class seat. Flight attendant gave me miles to compensate. The attendant was very professional and on top of his game the entire flight.

the whole trip was smooth, and as comfortable as flying is these days. flight crew was friendly and very courteous and helpful.

First class ticket gets you a choice of chips or nuts. . Just like economy Southwest. Also no screen in the seats. This is first class???!

Flight arrived 30 min early and bag was waiting at the baggage pickup. United Club HNL was one of the nicest in the system

Yet another flight in which beverage and snack service was skipped. Other that that, firmly mediocre. Landed early, to gate late due to congestion at the gates. Airline's fault or airports fault: unknown.

No WiFi, no outlets to charge phones, no complimentary beverages on a 6 hour flight

Flight was delayed more than 3 hours, and the metro had stopped running by the time we got to the terminal well past midnight, so I was stranded, alone, with no way to get home until the metro started up the next morning.

My flight was cancelled I missed time at work and got a parking ticket

Crew was very nice. Take off and landing were great. Economy seats are not comfortable. Extra cost for snacks.

The flight was delayed by 2 hours and we had no food or water or chargers

Horribly late because they had no crew!!! And then jet bridge didn’t work!! Then we arrived at a gate at lax miles away that we had to take a shuttle to a terminal!! I was over 3 hours late to getting the LA! Should have been here at 8:30 and at an appointment at 10:30 and arrived and left lax at 11 am!! Horrible experience!!!

Once again, the staff seem to think they are above the customers and treat everyone with disdain, belittling people.

Flight was canceled 8 hours before departure for lack of operational control and prepositioning of a plane. Then had the audacity to say it was because of weather, however there was no weather here in California or New Orleans or in between. It was the weather in Florida, Florida it had nothing to do with our flight path just the plane was supposed to fly us. 8 hours is more than enough time to move a plane anywhere in the US. That left me with a bill of 1200 dollars to re book a flight oh and kayaks insurance what a joke. Probably will never use kayak or spirit ever again terrible companies terrible customer service. I’ll also let everyone and anyone know this was an abomination and only for the customer. Also will be making a report to the DOT on bad business practices on behalf of kayak and spirit as well as the BBB. Do better, take care of your customers and don’t suck

The airplane had a strange noise that was constant throughout the flight. Thankfully I had noise-cancelling over-ear headphones that muted much of it.

it was terrible. flight was cancelled hours before the flight without a given reason and no other booking available .

Remind customers of the need to have passport or new ID for boarding.

The flight never took off and we spent 7 hours at the airport

Our flight was canceled. I will never use Kayak nor Frontier for travel again. The entire experience was a headache.

It was ok. It was expensive to check 2 bags ($75.00 per bag), and then it took a long time to wait for shuttle to take us from one terminal to the terminal where the plane was taking off at LAX. And all of this for a flight where we had to pay for any food or drink that was not water.

When I wanted to check in 3 hours prior to boarding time, the employees mentioned “a little over an hour delay” so I waited for an hour then I went to go look for food in the terminal and most people from that flight were in the same area looking for food. Finally I decided after food to check to see if it’s anytime closer and now it’s 2 mins until boarding closes?! What are you kidding me? I didn’t receive anything via sms about boarding now nor via email or on the intercom. I luckily made it through, barely, and then there’s no room for my carry on mind you I’m in the very first row so I had to place my purse in one further row back and my carry on sections down. Not sure who pays for better seats to get your stuff placed all over the plane but that was the worst experience I’ve ever had flying with anyone.

Terrible. The canceled my entire flight when I requested a refund for a trip frontier canceled trip one way.

i was unable to check in the flight. refund requested

I think Frontier was very good at communication. Their app worked very well. Loading was great and the flight was nice and easy.

This airline sucks. They offer low rates then charge you for everything, the app does not work well, the seats are the most uncomfortable. Maintenance issues on the flight, and you still have to sit through their credit card commercials. People are nice enough but does not make up for overall poor experience.

Great for the price. No wifi or entertainment, but gate agents and crew were fantastic and we boarded quickly and left on time.

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