$98 Find Cheap Flights from Puerto Rico to Houston

This is the cheapest one-way flight price found by a KAYAK user in the last 72 hours by searching for a flight to Houston departing on 10/29. Fares are subject to change and may not be available on all flights or dates of travel. Click the price to replicate the search for this deal.
1 adult
1 adult, Economy

KAYAK searches hundreds of travel sites at once for deals on flights to Houston

 
These are the airlines KAYAK users have selected most often from within our search results for flights to Houston, as well as popular online travel agencies
These are the airlines KAYAK users have selected most often from within our search results for flights to Houston, as well as popular online travel agencies
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Cheap Flights from Puerto Rico to Houston

 
Here are some of the best deals found on KAYAK recently from the most popular airlines for round-trip flights from Puerto Rico to Houston that are departing in the next months. While these flights were available on KAYAK in the last 72 hours, prices and availability are subject to change and deals may expire.
Discover the best prices for you by selecting your travel dates on KAYAK.

Recent round-trip flight deals from Puerto Rico to Houston

Thu, Nov 6 - Tue, Nov 11
American Airlines Logo
2:47 pm - 12:42 amSJU-IAH
11h 55m1 stop
American Airlines Logo
7:30 am - 5:52 pmIAH-SJU
8h 22m1 stop
$195American Airlines
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Fri, Sep 26 - Sun, Sep 28
American Airlines Logo
3:05 pm - 8:31 amSJU-HOU
18h 26m1 stop
American Airlines Logo
8:32 pm - 2:15 pmHOU-SJU
16h 43m1 stop
$195American Airlines
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Fri, Sep 26 - Wed, Oct 1
Spirit Airlines Logo
11:59 am - 10:42 pmSJU-IAH
11h 43m1 stop
Spirit Airlines Logo
5:30 am - 8:56 pmIAH-SJU
14h 26m1 stop
$196Spirit Airlines
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Mon, Nov 17 - Wed, Nov 19
Spirit Airlines Logo
6:00 am - 6:17 pmSJU-IAH
14h 17m1 stop
Spirit Airlines Logo
9:29 am - 3:46 pmIAH-SJU
4h 17mnonstop
$197Spirit Airlines
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Sat, Sep 27 - Tue, Sep 30
Frontier Logo
3:16 pm - 9:52 pmSJU-IAH
7h 36m1 stop
Frontier Logo
10:30 am - 9:56 amIAH-SJU
22h 26m2 stops
$238Frontier
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Fri, Oct 3 - Tue, Oct 7
Frontier Logo
8:00 am - 9:53 pmSJU-IAH
14h 53m2 stops
Frontier Logo
8:37 pm - 3:24 pmIAH-SJU
17h 47m2 stops
$250Frontier
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Wed, Nov 5 - Sun, Nov 9
Southwest Logo
11:20 am - 5:45 pmSJU-HOU
8h 25m2 stops
Southwest Logo
10:00 am - 1:25 amHOU-SJU
13h 25m2 stops
$255Southwest
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Thu, Nov 6 - Sun, Nov 9
Southwest Logo
5:40 am - 1:10 pmSJU-HOU
9h 30m2 stops
Southwest Logo
10:00 am - 1:25 amHOU-SJU
13h 25m2 stops
$295Southwest
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Thu, Feb 19 - Tue, Feb 24
United Airlines Logo
1:09 am - 8:33 amBQN-IAH
9h 24m1 stop
United Airlines Logo
1:35 pm - 11:57 pmIAH-BQN
8h 22m1 stop
$485United Airlines
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Mon, Nov 3 - Mon, Nov 10
United Airlines Logo
1:09 am - 5:25 pmBQN-IAH
18h 16m2 stops
United Airlines Logo
4:20 pm - 11:57 pmIAH-BQN
29h 37m2 stops
$521United Airlines
Find Deal

Everything you should know

Top airlines
United Airlines
Most flights • 14 per week
Southwest
Best reviews • 8.0 score
Airline reviews
Airline reviews
+1
+1
Airline reviews
Airline reviews
+1
When to book
2 weeks
in advance
Our data shows that travelers who book at least 2 weeks in advance save around 30% compared to booking last minute.
Insights
Insights
Insights
Insights
Cheapest round-trip
$195
Typical prices: $259-418
American Airlines
Thu 11/6Tue 11/11
SJU - IAH • 1 stop
Cheapest non-stop
$199
Typical prices: $237-449
Spirit Airlines
Thu 11/13Sun 11/16
SJU - IAH • Non-stop
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KAYAK searches 100s of sites at once to find you the best travel deals.
We hope you love your trip to Houston!
Booking Insights

KAYAK's insights & trends for flights to Houston

Get data-powered insights and trends for flights to Houston to help you find the cheapest flights, the best time to fly and much more.

What is a good deal for flights to Houston?

If you’re looking for cheap airfare to Houston, 25% of our users found tickets to Houston for the following prices or less: From San Juan Luis Munoz Marin Intl Airport $300 round-trip.

How far in advance should I book a flight to Houston?

To calculate weekly average prices, KAYAK takes all prices for each week before departure over the last year for round-trip flights to Houston, removes the top 0.1% to account for outliers, and then takes the average of all the values for each week.

To get a below average price, you should book around 2 weeks before departure, which saves you about 30% compared to booking last minute. For the absolute cheapest price, our data suggests you should book 19 weeks before departure.

Which is the cheapest airport to fly into in Houston?

Prices will differ depending on the departure airport, but generally, the cheapest airport to fly to in Houston is Houston Hobby Airport (HOU), with an average flight price of $253.

Good to know

Cheapest flight$98
Flight from San Juan to Houston George Bush Airport

FAQs - booking Houston flights

  • Which Houston airport is closest to central Houston?

    There are 2 major airports in Houston. The nearest airport from Houston city center is Houston Hobby Airport (9 miles), followed by Houston George Bush Airport (16 miles).

  • How much is a flight to Houston?

    On average, a flight to Houston costs $326. The cheapest price found on KAYAK in the last 2 weeks cost $106 and departed from San Juan Luis Munoz Marin Intl Airport.

  • What is the cheapest day to fly to Houston?

    Based on KAYAK data, the cheapest day to fly to Houston is Saturday where round-trip tickets can be as cheap as $405. On the other hand, the most expensive day to fly is Sunday, where round-trip prices are $634 on average.

  • How does KAYAK find such low prices on flights to Houston?

    KAYAK is a travel search engine. That means we look across the web to find the best prices we can find for our users. With over 2 billion flight queries processed yearly, we are able to display a variety of prices and options on flights to Houston.

  • How does KAYAK's flight Price Forecast tool help me choose the right time to buy my flight ticket to Houston?

    KAYAK’s flight Price Forecast tool uses historical data to determine whether the price for a flight to Houston is likely to change within 7 days, so travelers know whether to wait or book now.

  • What is the Hacker Fare option on flights to Houston?

    Hacker Fares allow you to combine one-way tickets in order to save you money over a traditional round-trip ticket. You could then fly to Houston with an airline and back with another airline.

  • What is KAYAK's "flexible dates" feature and why should I care when looking for a flight to Houston?

    Sometimes travel dates aren't set in stone. If your preferred travel dates have some wiggle room, flexible dates will show you all the options when flying to Houston up to 3 days before/after your preferred dates. You can then pick the flights that suit you best.

  • What is the cheapest time of day to fly to Houston?

    The cheapest time of day to fly to Houston is generally at night, when round-trip flights cost $386 on average. The most expensive time of day to fly to Houston is generally in the evening, which is peak travel time and where the average cost of a ticket is $495.

Top tips for finding cheap flights to Houston

  • Enter your preferred departure airport and travel dates into the search form above to unlock the latest Houston flight deals.

Reviews of the top 5 airlines serving from Puerto Rico to Houston

 
See real verified KAYAK customer reviews for airlines flying to Houston. Airline scores are aggregated from all reviews left by passengers on KAYAK after flying with an airline from Puerto Rico to Houston. KAYAK doesn’t show reviews that are older than 5 years. Learn how KAYAK collects reviews.
Need help choosing which airline to fly with to Houston? KAYAK airline reviews give an overall score for each airline based on loads of factors, including comfort, boarding, in-flight entertainment and more, to make your decision easier. See airline scores according to verified KAYAK customer reviews.
8.0
SouthwestOverall score based on 4245 reviews
8.0Comfort
7.0Food
7.5Entertainment
8.1Boarding
8.6Crew
Airline reviews

I wish they had movie screens in the headrests. The seats are much improved, more legroom and recently renovated. Bathroom was clean. Staff was outstanding!!

10.0 ExcellentG, Sep 2025LAS - ATL
Read more Southwest reviews

I wish they had movie screens in the headrests. The seats are much improved, more legroom and recently renovated. Bathroom was clean. Staff was outstanding!!

As always, the entire Southwest experience was wonderful, from online booking to flight to baggage retrieval. Very grateful.

Was good. I miss the free 2 checked bags. That was part of what made Southwest special

Multiple delays and gate changes. Arrived at final destination 6 hours late. All rental cars had been taken.

The movies using Southwest WiFi kept pausing and I had to restart multiple times.

First, my flight was a usual flight nothing exceptional or unexpected. Over all it was a normal, good flight! Second, your questionaire is wholly lacking in the proper options to which one can answer a question. Often on short flights, there is no food let alone entertainment so why isn't that reflected in your questionaire? A simple "not applicable" would cover that issue appropriately but no, your form arbitrarily enters an answer based on the initial assessment which normally isn't factual. Until you provide an accurate means of assessing flights, I'll no longer be completing of these unimpressive and misleading assessements. Thank you!

Easy to book and to get check in and get on and off.

First time I’ve ever missed a flight and it was an international flight.. Southwest put me on the next flight and it was the best experience possible.

It seems as though the provisions are even less. Although SWA used to be an economy Airline, that isn't really the case anymore. I paid over $700. for a round trip to Denver and I could have flown just about any airline for the price. The drinks are now in a 6-ounce cup and with ice I'm sure a can would fill more than 2 cups. However, I am very proud of SWA for using paper rather than continuing to contribute to the millions of plastic cups being used each day. I've thought of this fr many years and am so glad to see it come to fruition, if not by only SWA so far.

Service was great, boarding and exiting went smoothly, and the flight was very pleasant.

Flight was good and crew was super polite. However, there were around 5 kids screaming the WHOLE 2 hours. I understand kids have to come but parents need to do something to control their children. They make the experience terrible, especially after finishing 16 hour shifts at the hospital I needed some sleep, which I did not get.

Armrest controller on my seat 35D and nextbooennseat 35E did not work right. Hard to press buttons to recognize and 35D had constantnpressure either upmost down somit was nearly impossible to make selections. .

I flew with my dog and had already purchased my dog’s ticket. Even that morning I had called costumer service to insure that my husband and I had seats together since the website was giving me an error when choosing our seats and the representative mentioned our dog. I showed up early to the airport and when I got to the gate and we started boarding I was help back and told that I was supposed to have a yellow tag and that I should have checked in at the counter for them to give me that tag. I was not aware of this, the representative on the phone did not say anything. Nor did I see it anywhere in the checking process online, so if you travel with a pet and are not checking in luggage, just know that you still have to go to the check in counter when arriving at the airport unless you want to be the last one to board and not have room for your carry on in the overhead bins. Other than that, I had a great experience.

The experience was great, the crew was very polite and hospitable. I will definitely make if my go to airlines.

This flight was perfect. No complaints and only the highest regard for the crew and ground staff and how they executed perfectly. I fly a lot with United and would request predictability and transparency in their operations instead of last minute changes.

This is for UA2274 from Houston to Sacramento. The flight was delayed arriving due to mechanical issues so we left about 3 hours later than scheduled. When boarding the plane the temperature inside was excessive - likely close to 100. Pilot apologized and said it was going to improve at altitude, which it did. But before that I honestly thought there might have been more delays removing passengers made ill from the heat. We were delayed leaving due to another mechanical issue. There was not water on the plane due to a panel that was not secured. They did that quickly, but the combination of mechanical issues was rather disturbing and did not reflect well on United.

United sent me a mileage plus number last year but that number is invalid so I can’t use it to check into flights or collect mileage. There is human to speak about the problem, only computers who keep asking me if I am using the correct email. It’s so frustrating and I cannot resolve it.

The woman gate agent in Phoenix was none too sympathetic about my check-in process as I am relatively new with using apps. I almost did not get on because she said I did not check-in. I thought I had via Kayak where I purchased a very expensive ticket. Lesson learned but to be told I may not get on as a matter of factly was difficult to hear.

Flight was on time. Boarding was smooth. Flight attendants were friendly and efficient. Entertainment system was broken for all passengers on the left side of the aisle. I would prefer if meals were not served on red eye flights. No one should need to dine at that time and it is disturbing for those passengers trying to sleep.

Gate agent did not hold flight for connection, provided no assistance to get new flight

There's nothing I liked about it. For first off I scheduled this trip two weeks in advance then they delayed my flight which messed up my whole trip. So I scheduled it for the following weekend thinking there won't be a delay and guess what as soon as I got to the airport we said in the airplane on the tarmac for an hour and a half. Not only was it delayed I missed my connecting flight meaning I had to stay the night at Dallas-Fort Worth airport sleeping on the floor. I will tell you this I will never fly American airlines ever again I have had nothing but horrible experience with them and I just throw money at them

Having to reschedule flights a day later, they loaded by luggage on the wrong plane from Little rock now I have to HOPE they deliver it to where im staying like they said would. International flight crew was very disgruntled and not very friendly.

The entertainment package was vast and the selections were very current. Keep updating it was great.

Great flight. No issues at all. I still think boarding could be more efficient but otherwise, a good experience.

4 hours late, including over +1 hour waiting in plane to take off. Baggage left behind too.

No food offered, just chips. Crew was no nice. I had to Stand up and ask for a drink. Even for a midnight flight I have had better experiences from another airlines.

Our flight was 1.5 hours delayed. There was no weather for the inbound flight, so I don't understand why. This meant a VERY late arrival and only a quick nap before my morning flight.

It was very difficult to stretch my knee out and I am very short. I also had a torn tendon in my knee which made it extra uncomfortable anyways. My husband is 6'2" and I can't imagine him flying in that plane.

Delayed flight, so I switched fights to SFO to Phoenix , Phoenix to DSM. Excellent service through American Airlines

The AA app really sucks ... Every flight & connecting flights were delayed over 30 mins. One connecting flight on American Eagle said it was delayed in its arrival ... when it was actually parked across from the gate for over 1 hr before they pulled it to the gate. Seats in the economy/ main cabin are packed together like sardines ... no leg room.

For the minimalist experience, it is really a great ride-- feels a little like public transport i guess

I didn't order food. I requested a Tomato juice and was given a boody mary mix. The serve needs to warn the customer what their given. It wasn't a huge deal, but I wasted $4.50.

EVERYTHING! It was so bad that I will be filing a claim for reimbursement for my seat as I could not fully sit in it due to an obese person being next to me and spilling over into my "space." And my personal item in the overhead been got crushed between two suitcases, so now my business laptop has been damaged beyond repair. Also, it was expensive! Since you pay for EVERYTHING, the cost of the trip was probably more than if you I used an airline that was not discounted. I will NEVER fly Spirit Airlines again!

One of worst experienc my family have every had with this airline. I was informed my Kayak that my flight was delayed and that my family will not make it to houston for our connecting flight. I contacted Spirit customer service to get my family on a later flight due to the delay in Vagas and them not making their connecting flight. The customer rep keep telling me that the flight from vagas is on time and not delayed. She even make to go to the spirit app on my phone and show me how to look up weather or not the flight was delayed. The app showed "on time" 20 minutes later when my family arrived at the airport for their flight, they were told that the flight was delayed and she will not make her connecting flight. I call spirit airline customer support again that night and spoke to another rep who apologize for his collegue and he told me that my family will receive a credit for this, this was on Saturday I still have not received the credit or an email letting me know when I will be credited for this inconvenience. This is not good business and it need to be fixed.

It was very bad it got delayed by 2 hours.Never going to travel with spirit airlines in future.

Flight delayed over 3 or 4 hours because no captain to fly plane. I couldn’t make a connection and had to wait 9 hours for another flight. Had to fly red eye flight. Sucks

I wanted to upgrade my seat because I’m 6’2 and never have enough leg room for my comfort. They upgraded my seat for free putting me in an emergency exit seat. I was very comfortable

We had an almost 7 hour flight delay. We left the gate twice and taxi-ed and then returned the gate twice. Finally we got a new flight crew (our third one) and then left the gate to the final time before departing at 6:45pm (original flight time was 12pm). Out of Newark.

First off, i received an e-mail to allow me to check in for our flight. I folllowed the link, when it came to the seat selection, I was unable to select any "free" seats ( meaning without any additional charge) because everything was " unavailable". My Husband and I were ttavelling with our 3 children hence, i wanted to be assured that we were all seated next to each other. I tried 3 times and everytime I click the selection it said " error loading". What the system wants is for me to buy the seats ( anywhere from $25 to $50 dollars each passenger) like I did on our flight bound to L.A. I called customer service and the guy was unhelpful all he kept repeating was to come really early at the airport and we will be assigned seats there. Imagine my anxiety!!! Spirit says they are a budget airline but they are actually the opposite!! And just before our flight, the flight attendant KEPT announcing/ selling the seats that were not purchased for a cheaper price!! Like it was a bidding/ bargaining game! This was our first and last time to fly Spirit.

My flight got cancelled by Spirit airlines, it was bad experience to me

Seats were new and comfortable. Staff was fine. Missed my connection due to weather -which wasn’t their fault- but got no help at all. Gate staff sent me to customer service, which was and stayed unstaffed. Sign with QR code directed me to call or chat. Chat was useless. Call was returned after an hour. No itinerary offered by Frontier could get me home in less than 30 hours. Rebooked with another airline and got a partial refund that came to about 10 percent of what I paid to get home.

Finally a Frontier on time and efficient. I've had problems before with your airline, but this time everything went fine.

The experience was good. No frills but I got there safe and sound and on time.

Great for the price. No wifi or entertainment, but gate agents and crew were fantastic and we boarded quickly and left on time.

sluggish boarding and arrival procedures, fake nice flight attendants, and lots of delays.

Disaster. They lied every step of the way. We ended up being delayed due to crew and then allegedly abandoned the flight because of a curfew at LGA. No rebooking to LGA at any reasonable time. No hotel. No meal vouchers. Had to sleep in the airport and fly to Newark instead. Will never fly Frontier again.

What I expected, nickeled and dined and a frontier flight attendant loudly complained about her job and lack of communication as she headed to the gate on her cell phone. Not professional.

As every law enforcement agency I could imagine surrounded the plane and we didn’t disembark for 2 hours and then had to stick around for another hour to go get our personal belongings after leaving them behind and being bused away from the plane, it was scary and inconvenient. We were given no information as to why this was happening. Lack of communication with passengers was disappointing.

After boarding and un-boarding twice over 6+hours, the flight was canceled.

Severe turbulence. Captain never came on to reassure passengers after things settled down.

Everything you need to know for your flight to Houston

Cabin class types available on flights to Houston

Cabin classes available on flights to Houston. Prices are the lowest found on KAYAK over the last 7 days. Price and availability is not guaranteed.

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