$156 Find Cheap Flights from Puerto Rico to San Diego

This is the cheapest one-way flight price found by a KAYAK user in the last 72 hours by searching for a flight to San Diego departing on 7/16. Fares are subject to change and may not be available on all flights or dates of travel. Click the price to replicate the search for this deal.
1 adult
1 adult, Economy

KAYAK searches hundreds of travel sites at once for deals on flights to San Diego

 
These are the airlines KAYAK users have selected most often from within our search results for flights to San Diego, as well as popular online travel agencies
These are the airlines KAYAK users have selected most often from within our search results for flights to San Diego, as well as popular online travel agencies
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Cheap Flights from Puerto Rico to San Diego

 
Here are some of the best deals found on KAYAK recently from the most popular airlines for round-trip flights from Puerto Rico to San Diego that are departing in the next months. While these flights were available on KAYAK in the last 72 hours, prices and availability are subject to change and deals may expire.
Discover the best prices for you by selecting your travel dates on KAYAK.

Recent round-trip flight deals from Puerto Rico to San Diego

Tue, Jul 8 - Tue, Jul 22
Spirit Airlines Logo
2:15 am - 5:55 pmSJU-SAN
18h 40m2 stops
Spirit Airlines Logo
7:00 pm - 3:30 pmSAN-SJU
17h 30m2 stops
$285Spirit Airlines
Find Deal
Wed, Jul 9 - Tue, Jul 22
Spirit Airlines Logo
3:50 pm - 9:55 amSJU-SAN
21h 05m2 stops
Spirit Airlines Logo
7:00 pm - 3:30 pmSAN-SJU
17h 30m2 stops
$291Spirit Airlines
Find Deal
Thu, Jul 3 - Thu, Jul 10
Spirit Airlines Logo
1:02 pm - 11:29 pmSJU-SAN
13h 27m2 stops
Spirit Airlines Logo
6:15 am - 11:32 amSAN-SJU
26h 17m2 stops
$312Spirit Airlines
Find Deal
Wed, Oct 15 - Mon, Oct 20
American Airlines Logo
6:30 am - 10:03 pmSJU-SAN
18h 33m1 stop
American Airlines Logo
11:00 pm - 10:50 amSAN-SJU
8h 50m1 stop
$351American Airlines
Find Deal
Fri, Aug 15 - Mon, Aug 18
American Airlines Logo
12:00 pm - 9:54 pmSJU-SAN
12h 54m1 stop
American Airlines Logo
9:45 am - 11:59 pmSAN-SJU
11h 14m2 stops
$408American Airlines
Find Deal
Fri, Aug 15 - Mon, Aug 18
JetBlue Logo
8:25 am - 7:18 pmSJU-SAN
13h 53m1 stop
JetBlue Logo
8:29 pm - 12:06 pmSAN-SJU
12h 37m1 stop
$409JetBlue
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Tue, Jul 8 - Tue, Jul 22
United Airlines Logo
1:10 am - 9:41 amSJU-SAN
11h 31m1 stop
United Airlines Logo
3:25 pm - 5:30 amSAN-SJU
11h 05m1 stop
$429United Airlines
Find Deal
Mon, Nov 17 - Tue, Dec 2
United Airlines Logo
2:05 am - 10:05 amSJU-SAN
12h 00m1 stop
United Airlines Logo
10:25 pm - 12:49 pmSAN-SJU
10h 24m1 stop
$441United Airlines
Find Deal
Sat, Jul 26 - Sun, Aug 3
JetBlue Logo
10:35 am - 6:55 pmSJU-SAN
11h 20m1 stop
JetBlue Logo
9:00 pm - 12:06 pmSAN-SJU
12h 06m1 stop
$450JetBlue
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Thu, Aug 7 - Thu, Aug 14
Alaska Airlines Logo
3:15 pm - 9:36 pmSJU-SAN
9h 21m1 stop
Alaska Airlines Logo
10:45 pm - 2:05 pmSAN-SJU
12h 20m1 stop
$555Alaska Airlines
Find Deal
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KAYAK's insights & trends for flights to San Diego

Get data-powered insights and trends for flights to San Diego to help you find the cheapest flights, the best time to fly and much more.

What is the cheapest month to fly to San Diego?

To calculate monthly average prices, KAYAK takes all prices for each month over the last year for flights to San Diego, removes the top 0.1% to account for outliers, and then takes the median of all values for each month.

The cheapest month for flights to San Diego is August, where tickets cost $382 on average for return flights. On the other hand, the most expensive months are February and December, where the average cost of tickets from Puerto Rico is $583 and $574 respectively. For one-way flights, the best month to travel is August with an average price of $382.

How far in advance should I book a flight to San Diego?

To calculate weekly average prices, KAYAK takes all prices for each week before departure over the last year for round-trip flights to San Diego, removes the top 0.1% to account for outliers, and then takes the average of all the values for each week.

To get a below average price, you should book around 3 weeks before departure. For the absolute cheapest price, our data suggests you should book 21 weeks before departure.


Good to know

Low seasonFebruary
High seasonDecember
Cheapest flight$156
Best time to beat the crowds but there is an average 16% increase in price.
Most popular time to fly with an average 14% increase in price.
Flight from San Juan to San Diego

FAQs - booking San Diego flights

  • How far is San Diego Airport from central San Diego?

    There are 3 miles between San Diego city center and San Diego Airport.

  • What is the name of San Diego’s airport?

    San Diego is served by San Diego Airport, also commonly referred to as Lindbergh Field, San Diego, or San Diego Intl. The airport code is SAN.

  • What is the cheapest day to fly to San Diego?

    Based on KAYAK data, the cheapest day to fly to San Diego is Thursday where round-trip tickets can be as cheap as $448. On the other hand, the most expensive day to fly is Friday, where round-trip prices are $538 on average.

  • How does KAYAK find such low prices on flights to San Diego?

    KAYAK is a travel search engine. That means we look across the web to find the best prices we can find for our users. With over 2 billion flight queries processed yearly, we are able to display a variety of prices and options on flights to San Diego.

  • How does KAYAK's flight Price Forecast tool help me choose the right time to buy my flight ticket to San Diego?

    KAYAK’s flight Price Forecast tool uses historical data to determine whether the price for a flight to San Diego is likely to change within 7 days, so travelers know whether to wait or book now.

  • What is the Hacker Fare option on flights to San Diego?

    Hacker Fares allow you to combine one-way tickets in order to save you money over a traditional round-trip ticket. You could then fly to San Diego with an airline and back with another airline.

  • What is KAYAK's "flexible dates" feature and why should I care when looking for a flight to San Diego?

    Sometimes travel dates aren't set in stone. If your preferred travel dates have some wiggle room, flexible dates will show you all the options when flying to San Diego up to 3 days before/after your preferred dates. You can then pick the flights that suit you best.

  • What is the cheapest time of day to fly to San Diego?

    The cheapest time of day to fly to San Diego is generally in the afternoon, when round-trip flights cost $474 on average. The most expensive time of day to fly to San Diego is generally in the morning, which is peak travel time and where the average cost of a ticket is $563.

  • How many direct flights to San Diego are there each week?

    Each week there are around 2,201 direct flights from within Puerto Rico to San Diego. The most common day for departures is Friday, with 16% of flights taking off on this day.

Top tips for finding cheap flights to San Diego

  • Enter your preferred departure airport and travel dates into the search form above to unlock the latest San Diego flight deals.

Top 5 airlines serving from Puerto Rico to San Diego

 
See real verified KAYAK customer reviews for airlines flying to San Diego. Airline scores are aggregated from all reviews left by passengers on KAYAK after flying with an airline from Puerto Rico to San Diego. KAYAK doesn’t show reviews that are older than 5 years. Learn how KAYAK collects reviews.
Need help choosing which airline to fly with to San Diego? KAYAK airline reviews give an overall score for each airline based on loads of factors, including comfort, boarding, in-flight entertainment and more, to make your decision easier. See airline scores according to verified KAYAK customer reviews.
8.0
Alaska AirlinesOverall score based on 10000 reviews
8.5Crew
8.1Boarding
7.8Comfort
7.1Entertainment
7.1Food
Airline reviews

Horrible! No blanket or pillow available! We had bulkhead seats but the seats were worn out and no cushion old. No meal or even a sandwich for our 5 hour flight just a little bag of pretzels. Crabby attendant female with long brown hair. We will not book Alaska Airlines again

4.0 OkayAnonymous, Jun 2025KOA - SAN
Read more Alaska Airlines reviews

Horrible! No blanket or pillow available! We had bulkhead seats but the seats were worn out and no cushion old. No meal or even a sandwich for our 5 hour flight just a little bag of pretzels. Crabby attendant female with long brown hair. We will not book Alaska Airlines again

I do wish the the actual airplane I flew on was bigger. But, I made it work.

I loved that we boarded orderly and quickly, that I had an opportunity to check my bag free at the gate, that there was plenty of seat/leg room, there was smooth takeoff and landing, the attendants were pleasant and helpful, and that we arrived on time!!

We were in first class. Food was surprisingly good. Boarding was easy. Seats were lumpy. No video screen ...really? Service was good. Phone support was good

The staff and crew were excellent. The entire flight process was so friendly and smooth.

flight was canceled. don't cancel flights if you want a better score.

Missed connection due to waiting on tarmac for gate. Rebooking took 30 minutes in line with 2 people in line in front. Horrible inefficient careless staff.

The flight was canceled and very little help given at the check in desk. Everyone at the desk says: just go on the app and see how they rebooked you. I mean come on it’s embarrassing customer service.

The registration was chaotic. The kiosks didn't work for most people, and most had to do registration and receive boarding slips with a person. It took about an hour to get through he process, and I was worrying that I will be late to the flight. However, the personnel was great - courteous, professional, and was able to work through the problems.

I upgraded my seat and the service and boarding were wonderful. My flight attendant was very helpful when I experienced nausea on the flight (a first time experience). Flight arrived early which was nice. The only negative was many airlines have screens to provide some on flight entertainment, this aircraft did not. I had planned to read and listen to an audiobook on my flights, so no big deal on my part. The USB plug ins were broken on both my seat and the center seat, so I was not able to charge my phone during the flight, I will add 2 of the three USBs were broken on ride from San Diego as well. I would attribute this to the design, it is a very awkward angle to plug in, so frequent and perhaps not so gentle attempts to plug in have caused them to break.

5 hours of delay that could've been much shorter if Delta had taken the 1 hour delay they imposed on the flight before boarding to run any of the plane checks required for flight to find the hydraulic issue that required nearly 3 hours to fix. $24 of meal credit buys a sandwich and a soft drink. Poor communication within the terminal about what gate we'd be re-boarding from and when we'd be re-boarding.

The entertainment and wifi mostly didn't work on this flight.

Terrible entertainment system - kept freezing and audio kept cutting out. Snacks were mediocre at best for a 5 hour flight.

I am still upset that my bag was lost on a recent trip to Rome ; we were inconvenienced and out €150 Euros ; delta has refused to reimburse us

This had nothing to do with Delta… The flights were on time and flawless. The service was excellent. We purchased seats in (aisle/middle) comfort plus since this was a cross country flight. Unfortunately, the woman seated at the window was 300+ pounds and, as might be expected, covered up about a third of the middle seat also. there was absolutely nothing that Delta could have done about that… I just don’t know what the answer should be. If you purchase a seat, you should should be able to use the entire seat and not just the portion that someone else is not sitting/oozing in. Disappointing…there should be something that could be done….I'm just not sure what solution could be.

I love the free WiFi!! Crew was nice. Bathroom was decent. First time flying delta in a long time and I enjoyed it. Will definitely look into booking with Delta more but I think Delta is a little more expensive than the other airlines.

Seats are much much more comfortable than United, which is what I usually fly

If I pay extra for "comfort+" I expect leg room where I can stretch my legs. I was seated with an attendant's seat blocking my feet. Knee space was fine but my feet had less room than the non-"comfort+" seats. Also, don't go cheap on food when you have flights of 3+ hours. It's insulting.

Only one side of the heafphone jack work. Crew was friendly and helpful.

Great. Flight departed early and arrived early. Deplaning and baggage claim ww were quick.

Boarding was mayhem. Late boarding by 15 minutes because of lack of staff (missing 1 flight attendant. We had to wait for an arrival of another plane before we could board). Flight was a little rough, but cannot blame on airlines.

Great experience…left a bit behind schedule but made up fir that in the air and landed 10 minutes early 😁

Airbus plane, nice and polite staff, entertainment even as it was a short flight.

United out of SFO is having issues with catering so none of our meals were loaded on the plane and no offer of compensation for our tickets purchased was offered.

Its good expeince but in enternteiment please be like you tube the music i like or movie

I needed to make changes to my flights. When I called customer service, they assisted me with care professionalism.

A bit rush for transit. Food and entertainment are not available

Wonderful and fast TSA checkpoint. The line was fast and our gate was close by

The gate was too far away for the connecting flight

Generally good. The aisles have gotten narrower which can slow down boarding. Flight crew was great! Healthier complimentary snacks would be appreciated. Due to earthquake in San Francisco we had to circle in air space for a bit but then had a smooth landing. I laud the flight crew for their patience ;)

The check in and boarding process was a bit of a cluster. Two people at the counter to check in, three random lines that nobody knew which was for what, and people kept getting shuffled from one line to another for no apparent reason because then they’d get shuffled back and end up getting out further back in the line than they were originally. I only had to hand my already checked bag over and it took 45 minutes. I was never assigned a seat so when I tried to board I was pulled out of line again while someone had to try to manually assign me a seat. During the flight I got up to go to the bathroom, and there was an attendant in the aisle offering pillows etc and it was a 30 min wait unbuckled standing by the bathrooms because she said I couldn’t go past her. First and last time flying jet blue to be honest.

Communication since no reason or explanation was given for 3 hrs delay

Flight was delayed several 3 hours - no reason was given and no communication what so ever.

No overhead baggage room even though I was seated in row 2. Consequently had to check in my carry on bag. Baggage carousel was jammed. Took 45 min to get my bag.

Excellent. Although they used to greet me as a mosaic member and provide a free drink, early boarding helps me to keep coming back to JetBlue.

Great flight. Departed early, arrived early. However they were out of meals for sale. Also, we arrived early and the gate was not available so we sat on the taxiway for quite a while (not JetBlue’s fault).

The gate and ground staff were excellent, friendly, went out of their way to acknowledge my Mosaic status. The plane was an older Airbus, so the seats were a little worn. The in flight attendant was not very nice, and seemed to be annoyed to be at work or be on this flight. Flight was fast and we landed early and pilots kept us informed.

Cancelled flight with no specific instructions to get a boarding pass for another flight. The whole flight of people were in line for an hour because there was only 1 person to help at the desk. This was unusual for JetBlue.

The inflight system with their wifi is a hot mess and doesn't work. Separately they do, but when you try to do theoretically simple things like pair a device for control it all falls apart

It was too hot in the cabin. The AC did not help.

Loved the staff, boarding and drink options! Wish the comfort of the seat could have been better nevertheless

Honestly, I haven’t flown American in years, probably due to the pandemic and my being unable to travel for certain periods in the last two years, but it was a good experience to dig out or obtain a new American Airlines account after many years of traveling for business with American in the past.

Long 5 hour and 45 min flight and only one drink service and cookie snack

One bottle of water and a package of cookies for comfort plus. We had to literally beg a flight attendant for an extra bottle of water later in the flight due to feeling dehydrated.

Flight boarded from Gate 39 at OGG, the farthest gate in the terminal. There were no Hawaiian themed amenities for the flight. The first class service was mediocre at best; I received not special welcome or recognition as an executive platinum member of American Advantage program. The flight attendants were more concerned with their cell phones than saying "thank you" to the passengers as we disembarked. Fortunately, the flight arrived at LAX a few minutes early.

Bigger seats. Board back to front! Disembark front to back!

Extraordinary service in business class, and very good breakfast and snacks. A really lovely flight.

This flight didn’t happen because AA agents didn’t let us board the flight

Plane was pretty clean, staff was friendly and helpful, flight left about on time arrived early. Took a long time to board and get off the plane - carry on items didn't have enough room so people had to move all around to find places.

The service and food needs to improve to catch up with other international flights

Everything you need to know for your flight to San Diego

Information on the airport you'll fly into in San Diego

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